RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 AKAP1Q92667 903 aaKnown RBP eCLIP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 ADIPOR1Q96A54 375 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 PHF7Q9BWX1 381 aaPredicted RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 ADAM19Q9H013 955 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 BRD7Q9NPI1 651 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 PAQR5Q9NXK6 330 aaPredicted RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 COL5A1P20908 1838 aaPredicted RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 OR6C70A6NIJ9 312 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 CCDC85CA6NKD9 419 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 CPNE3O75131 537 aaKnown RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 DHFRP00374 187 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 C1QBP02746 253 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 CTXN1P60606 82 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 DEFB133Q30KQ1 61 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 GPR139Q6DWJ6 353 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 ASB18Q6ZVZ8 466 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 YIPF7Q8N8F6 280 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 LSM14AQ8ND56 463 aaKnown RBP15.68■□□□□ 0.1
BRCA2-204ENST00000530893 OR5H6Q8NGV6 325 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 ZNF721Q8TF20 911 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 MOGAT1Q96PD6 335 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 PDCD1LG2Q9BQ51 273 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 OR8D2Q9GZM6 311 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 FKRPQ9H9S5 495 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 TMEM165Q9HC07 324 aa15.68■□□□□ 0.1
BRCA2-204ENST00000530893 A0A1W2PQD3 144 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 OIP5O43482 229 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 GSTZ1O43708 216 aaPredicted RBP15.67■□□□□ 0.1
BRCA2-204ENST00000530893 DDAH2O95865 285 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 TCEA1P23193 301 aaKnown RBP15.67■□□□□ 0.1
BRCA2-204ENST00000530893 MST1P26927 711 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 NXPH1P58417 271 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 SMAD4Q13485 552 aaKnown RBP15.67■□□□□ 0.1
BRCA2-204ENST00000530893 NTRK2Q16620 822 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 SLC36A2Q495M3 483 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 UBE2NLQ5JXB2 153 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 APOOLQ6UXV4 268 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 FAM220AQ7Z4H9 259 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 TDHQ8IZJ6 230 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 SLC7A5P1Q8MH63 180 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 TOMM5Q8N4H5 51 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 OR2T4Q8NH00 348 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 ZNF563Q8TA94 476 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 YIPF5Q969M3 257 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 LPAR4Q99677 370 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 TMEM246Q9BRR3 403 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 YIPF2Q9BWQ6 316 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 DPAGT1Q9H3H5 408 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 GRHPRQ9UBQ7 328 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 A0A1W2PPK0 400 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 TCRBV16S1A1N1A0A5B0 115 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 TO15178 435 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 MBTPS2O43462 519 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 SNRPBP14678 240 aaKnown RBP15.67■□□□□ 0.1
BRCA2-204ENST00000530893 POU3F3P20264 500 aaPredicted RBP15.67■□□□□ 0.1
BRCA2-204ENST00000530893 GZMKP49863 264 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 AGFG1P52594 562 aaKnown RBP15.67■□□□□ 0.1
BRCA2-204ENST00000530893 FAPQ12884 760 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 MAB21L1Q13394 359 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 NANOGNBQ7Z5D8 188 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 ZNF321PQ8N8H1 164 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 DAZLQ92904 295 aaKnown RBP15.67■□□□□ 0.1
BRCA2-204ENST00000530893 CLIP3Q96DZ5 547 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 NUBP2Q9Y5Y2 271 aa15.67■□□□□ 0.1
BRCA2-204ENST00000530893 CENPBD1B2RD01 187 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 CDC40O60508 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
BRCA2-204ENST00000530893 EIF4E2O60573 245 aaKnown RBP15.66■□□□□ 0.1
BRCA2-204ENST00000530893 ITGA10O75578 1167 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 HIST1H2ABP04908 130 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 MAPK3P27361 379 aaPredicted RBP15.66■□□□□ 0.1
BRCA2-204ENST00000530893 BTCP35070 178 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 PSMB10P40306 273 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 ARL4DP49703 201 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 HIST3H2AQ7L7L0 130 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 KRT74Q7RTS7 529 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 PLXDC1Q8IUK5 500 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 DEFB119Q8N690 84 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 ZNF671Q8TAW3 534 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 HIST1H2ACQ93077 130 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 ADOQ96SZ5 270 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 GTPBP2Q9BX10 602 aaKnown RBP15.66■□□□□ 0.1
BRCA2-204ENST00000530893 BEX2Q9BXY8 128 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 NOX4Q9NPH5 578 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 ZNF275Q9NSD4 429 aaPredicted RBP15.66■□□□□ 0.1
BRCA2-204ENST00000530893 AK6Q9Y3D8 172 aaKnown RBP15.66■□□□□ 0.1
BRCA2-204ENST00000530893 NUP210LQ5VU65 1888 aa15.66■□□□□ 0.1
BRCA2-204ENST00000530893 HSPB2A8KAH6 182 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 AIPO00170 330 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 SCO2O43819 266 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 MAOBP27338 520 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 TACR3P29371 465 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 IL12BP29460 328 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 OR1D4P47884 311 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 RAG2P55895 527 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 RPL18Q07020 188 aaKnown RBP15.65■□□□□ 0.1
BRCA2-204ENST00000530893 TNK1Q13470 666 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 DYRK1AQ13627 763 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 EBPQ15125 230 aaKnown RBP15.65■□□□□ 0.1
BRCA2-204ENST00000530893 HSPB2Q16082 182 aa15.65■□□□□ 0.1
BRCA2-204ENST00000530893 SNAP47Q5SQN1 464 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms