RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ISL2Q96A47 359 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 ANKRD9Q96BM1 317 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-227ENST00000530748 KCTD12Q96CX2 325 aaKnown RBP7.86□□□□□ -1.15
CTNND1-227ENST00000530748 TNFRSF13CQ96RJ3 184 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF436Q9C0F3 470 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-227ENST00000530748 GLIPR2Q9H4G4 154 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 GAREM1Q9H706 876 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 GALNT9Q9HCQ5 603 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 RPS10P5Q9NQ39 176 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 DECR2Q9NUI1 292 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 PSORS1C1Q9UIG5 152 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 SH3BGRL2Q9UJC5 107 aa7.86□□□□□ -1.15
CTNND1-227ENST00000530748 MEIOCA2RUB1 952 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 NKX6-3A6NJ46 265 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF814B7Z6K7 855 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SYT5O00445 386 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 DPM1O60762 260 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 HLA-AP01891 365 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SERPINA7P05543 415 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ETV5P41161 510 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 BIDP55957 195 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 NKX6-1P78426 367 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 BPIFB2Q8N4F0 458 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 LMNTD1Q8N9Z9 388 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CXCL16Q9H2A7 254 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 MRPS28Q9Y2Q9 187 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ETV7Q9Y603 341 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ANKRD34BA5PLL1 514 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 TUSC2O75896 110 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CR2P20023 1033 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CD27P26842 260 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 TNFSF8P32971 234 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 EIF2DP41214 584 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 OR1D5P58170 312 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 RUNX2Q13950 521 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SPRED3Q2MJR0 410 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 LEXMQ3ZCV2 418 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 YOD1Q5VVQ6 348 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 FAM111BQ6SJ93 734 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ENTHD1Q8IYW4 607 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 RDH10Q8IZV5 341 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 OR52I1Q8NGK6 324 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 PAQR8Q8TEZ7 354 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 HSD17B8Q92506 261 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 C20orf27Q9GZN8 174 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 P2RY12Q9H244 342 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF576Q9H609 170 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 HAO2Q9NYQ3 351 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SLC23A2Q9UGH3 650 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 TRAPPC2LQ9UL33 140 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 USP22Q9UPT9 525 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ATG4BQ9Y4P1 393 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 A0A1B0GX78 115 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 LINC01553A4QN01 128 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 PRAMEF25A6NGN4 478 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 HSBP1L1C9JCN9 74 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF587BE7ETH6 402 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 IL2RGP31785 369 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SLC1A3P43003 542 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 GRB2P62993 217 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 RACK1P63244 317 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CSNK1G2P78368 415 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 FOXK2Q01167 660 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CATR1Q13166 79 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 IKZF1Q13422 519 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 RBMS2Q15434 407 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 TBC1D28Q2M2D7 210 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 YIF1BQ5BJH7 314 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 FAM71E1Q6IPT2 247 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ZNF529Q6P280 563 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 MARCH3Q86UD3 253 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 TMEM178AQ8NBL3 297 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SPPL3Q8TCT6 385 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 QRSL1Q9H0R6 528 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SLC6A17Q9H1V8 727 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 HOXC11O43248 304 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CTNSO60931 367 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 TK1P04183 234 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 LIPCP11150 499 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 NAGAP17050 411 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 EN2P19622 333 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 FPR3P25089 353 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 RPS18P62269 152 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CXADRP78310 365 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SIRPAP78324 504 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 ALKBH1Q13686 389 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 C14orf28Q4W4Y0 310 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 PRAMEF20Q5VT98 475 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SAXO2Q658L1 398 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 GPR155Q7Z3F1 870 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 SMIM3Q9BZL3 60 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 AMBRA1Q9C0C7 1298 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CALHM2Q9HA72 323 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 NOX4Q9NPH5 578 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 WASH6PQ9NQA3 447 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 KIF25Q9UIL4 384 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 MRPS2Q9Y399 296 aaKnown RBP7.85□□□□□ -1.15
CTNND1-227ENST00000530748 NHSL1Q5SYE7 1610 aa7.85□□□□□ -1.15
CTNND1-227ENST00000530748 TCRBV5S1A1TA0A578 114 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms