RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SNRPD2P62316 118 aaKnown RBP18.23■□□□□ 0.51
SMPD1-204ENST00000530395 LGALS3BPQ08380 585 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 LOXL1Q08397 574 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-204ENST00000530395 TMEM249Q2WGJ8 235 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 LRIF1Q5T3J3 769 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 AGBL2Q5U5Z8 902 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 ANKRD16Q6P6B7 361 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 CXXC5Q7LFL8 322 aaKnown RBP18.23■□□□□ 0.51
SMPD1-204ENST00000530395 HIPK1Q86Z02 1210 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 NFKBIDQ8NI38 313 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 MAGEE2Q8TD90 523 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-204ENST00000530395 DNAJA4Q8WW22 397 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-204ENST00000530395 BCL2L2Q92843 193 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-204ENST00000530395 SLC38A4Q969I6 547 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 SPDL1Q96EA4 605 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 KTI12Q96EK9 354 aaPredicted RBP18.23■□□□□ 0.51
SMPD1-204ENST00000530395 YLPM1P49750 1951 aaKnown RBP18.22■□□□□ 0.51
SMPD1-204ENST00000530395 A0A096LNT2 108 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 ARPC4-TTLL3A0A0A6YYG9 625 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 AKAP8O43823 692 aaKnown RBP18.22■□□□□ 0.51
SMPD1-204ENST00000530395 GPRIN2O60269 458 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 SLC43A1O75387 559 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 UPK3AO75631 287 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 NCALDP61601 193 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 ROR2Q01974 943 aaKnown RBP18.22■□□□□ 0.51
SMPD1-204ENST00000530395 EGR4Q05215 589 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 C1DQ13901 141 aaKnown RBP18.22■□□□□ 0.51
SMPD1-204ENST00000530395 C3orf36Q3SXR2 165 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 CHRFAM7AQ494W8 412 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 C6orf52Q5T4I8 152 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 FAM69AQ5T7M9 428 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 REEP3Q6NUK4 255 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 BLOC1S3Q6QNY0 202 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 KDM8Q8N371 416 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 LSMEM1Q8N8F7 131 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 ANKK1Q8NFD2 765 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 C10orf105Q8TEF2 133 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 PROX1Q92786 737 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 OXGR1Q96P68 337 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 CCDC28BQ9BUN5 200 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 SLC25A37Q9NYZ2 338 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 SELENONQ9NZV5 590 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 CCDC167Q9P0B6 97 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 CORO2BQ9UQ03 480 aa18.22■□□□□ 0.51
SMPD1-204ENST00000530395 A0A096LPE4 126 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 A0A1B0GWA3 101 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 A0A1W2PPZ6 126 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 F12P00748 615 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-204ENST00000530395 HOXB1P14653 301 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-204ENST00000530395 IDH3AP50213 366 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 VLDLRP98155 873 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 CDK6Q00534 326 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 IL1RL1Q01638 556 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 SWI5Q1ZZU3 235 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 ALG10BQ5I7T1 473 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 PODNL1Q6PEZ8 512 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 DHRS4L2Q6PKH6 230 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 LINGO2Q7L985 606 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 NET1Q7Z628 596 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-204ENST00000530395 FUNDC1Q8IVP5 155 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 GPR137CQ8N3F9 429 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 CA10Q9NS85 328 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 SLC13A4Q9UKG4 626 aa18.21■□□□□ 0.51
SMPD1-204ENST00000530395 TRAV36DV7A0A075B6V5 113 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 PRORSD1PA6NEY8 169 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 M0R082 166 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 FZD7O75084 574 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 HTR2AP28223 471 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 SERPINF1P36955 418 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 FAM91A1Q658Y4 838 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 ULK3Q6PHR2 472 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 MSRB3Q8IXL7 192 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 BHLHE22Q8NFJ8 381 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-204ENST00000530395 SPATA3Q8NHX4 192 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 ZNF417Q8TAU3 575 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 TAAR8Q969N4 342 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 ZNF607Q96SK3 696 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 ZNF587Q96SQ5 575 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-204ENST00000530395 EBF4Q9BQW3 602 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 SLCO1B3Q9NPD5 702 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 SLAMF8Q9P0V8 285 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 CRNNQ9UBG3 495 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-204ENST00000530395 SEC14L4Q9UDX3 406 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 TESQ9UGI8 421 aaKnown RBP18.2■□□□□ 0.5
SMPD1-204ENST00000530395 STAB1Q9NY15 2570 aa18.2■□□□□ 0.5
SMPD1-204ENST00000530395 EVPLLA8MZ36 301 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 RPL36A-HNRNPH2H7BZ11 118 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 PDE5AO76074 875 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 ZNF432O94892 652 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 SLC6A2P23975 617 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 GRPRP30550 384 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 PDLIM4P50479 330 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 AQP5P55064 265 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 RGS8P57771 180 aaPredicted RBP18.19■□□□□ 0.5
SMPD1-204ENST00000530395 TUBA1BP68363 451 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 TUBA4AP68366 448 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 NAAAQ02083 359 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 SCARB2Q14108 478 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 MFSD13AQ14CX5 517 aa18.19■□□□□ 0.5
SMPD1-204ENST00000530395 MST1LQ2TV78 715 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms