RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
TTC39A-216ENST00000530004 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 CPOQ8IVL8 374 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 HIST1H2ACQ93077 130 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 RFKQ969G6 155 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 MUL1Q969V5 352 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 SLC25A36Q96CQ1 311 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 JSRP1Q96MG2 331 aaPredicted RBP12.98□□□□□ -0.33
TTC39A-216ENST00000530004 TUBA1CQ9BQE3 449 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 TAPBPLQ9BX59 468 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 SLC25A18Q9H1K4 315 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 FN3KQ9H479 309 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 ACOT13Q9NPJ3 140 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 IER3IP1Q9Y5U9 82 aa12.98□□□□□ -0.33
TTC39A-216ENST00000530004 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
TTC39A-216ENST00000530004 RIIAD1A6NNX1 92 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 H3BSA7 217 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 INMTO95050 263 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 MT-ATP6P00846 226 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 IFNGP01579 166 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ZNF3P17036 446 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 MEOX1P50221 254 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 CDH11P55287 796 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ANKDD1AQ495B1 522 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ALG10Q5BKT4 473 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 NXNL2Q5VZ03 156 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 SLC6A19Q695T7 634 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 TIGD3Q6B0B8 471 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 GTF2IRD2BQ6EKJ0 949 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 GTF2IRD2Q86UP8 949 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ATP6V1C2Q8NEY4 427 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 BBS1Q8NFJ9 593 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 OR1J4Q8NGS1 313 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 RORBQ92753 470 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 RNFT2Q96EX2 444 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 GNRHR2Q96P88 292 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 GPX7Q96SL4 187 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ADAM18Q9Y3Q7 739 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 CEPT1Q9Y6K0 416 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 COMMD3-BMI1R4GMX3 469 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 LRRC3CA6NJW4 275 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ZNF99A8MXY4 864 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ZNF208O43345 1280 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ADRA2AP08913 450 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 IL11P20809 199 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 TTKP33981 857 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ERVK-25P63136 954 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 RPL18Q07020 188 aaKnown RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 LY6DQ14210 128 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 PLEKHN1Q494U1 663 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ZNF362Q5T0B9 420 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 LRRC75AQ8NAA5 344 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ZFP62Q8NB50 900 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 OR5M1Q8NGP8 315 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 OR13F1Q8NGS4 319 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 DDIT4LQ96D03 193 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 DGCR14Q96DF8 476 aaKnown RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 WBP1Q96G27 269 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 TMEM80Q96HE8 168 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 KATNB1Q9BVA0 655 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 MED20Q9H944 212 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 ZFP64Q9NPA5 681 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 NRIP3Q9NQ35 241 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 TAS2R16Q9NYV7 291 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 H2AFY2Q9P0M6 372 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 BOKQ9UMX3 212 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-216ENST00000530004 LHX6Q9UPM6 363 aa12.97□□□□□ -0.33
TTC39A-216ENST00000530004 A0A087WZY1 265 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 PRR23D1E9PI22 279 aaPredicted RBP12.96□□□□□ -0.34
TTC39A-216ENST00000530004 OR2T1O43869 369 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 SEC14L2O76054 403 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 TSPAN19P0C672 248 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 PRR23D2P0DMB1 279 aaPredicted RBP12.96□□□□□ -0.34
TTC39A-216ENST00000530004 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.34
TTC39A-216ENST00000530004 HTR1FP30939 366 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 MTNR1AP48039 350 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 MAP2K6P52564 334 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 GP2P55259 537 aaKnown RBP12.96□□□□□ -0.34
TTC39A-216ENST00000530004 FOXK1P85037 733 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 ITGADQ13349 1161 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 CRMP1Q14194 572 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 TBCEQ15813 527 aaPredicted RBP12.96□□□□□ -0.34
TTC39A-216ENST00000530004 NIPAL3Q6P499 406 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 CLVS1Q8IUQ0 354 aaPredicted RBP12.96□□□□□ -0.34
TTC39A-216ENST00000530004 GID4Q8IVV7 300 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 CYB561A3Q8NBI2 242 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 FAM98AQ8NCA5 519 aaKnown RBP12.96□□□□□ -0.34
TTC39A-216ENST00000530004 SDR9C7Q8NEX9 313 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 OR52I1Q8NGK6 324 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 SLC39A7Q92504 469 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 PNPLA2Q96AD5 504 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.34
TTC39A-216ENST00000530004 ARL5BQ96KC2 179 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms