RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 ZNF354AO60765 605 aaPredicted RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 NOL3O60936 208 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 OR7A10O76100 309 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 SNRNP70P08621 437 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 BMP7P18075 431 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 PCMT1P22061 227 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 CCKBRP32239 447 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 CCR9P51686 369 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 FBXW4P57775 412 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 CDK5Q00535 292 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 INSM1Q01101 510 aaPredicted RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 ZSWIM7Q19AV6 140 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 TRIM16LQ309B1 348 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 GXYLT1Q4G148 440 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 FAM76BQ5HYJ3 339 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 HES5Q5TA89 166 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 LCN1P1Q5VSP4 162 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 OAFQ86UD1 273 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 SLCO6A1Q86UG4 719 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 RNF113BQ8IZP6 322 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 SVOPQ8N4V2 548 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 KDF1Q8NAX2 398 aaPredicted RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 OR4Q3Q8NH05 313 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 FAR1Q8WVX9 515 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 GTF3AQ92664 365 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 VRK1Q99986 396 aaPredicted RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 ENKD1Q9H0I2 346 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 EVA1AQ9H8M9 152 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 TREM1Q9NP99 234 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 NUP50Q9UKX7 468 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 B3GNT3Q9Y2A9 372 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 NPFFR2Q9Y5X5 522 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 HEATR5AQ86XA9 2040 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 ELOA3DA6NLF2 546 aaPredicted RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 ZNF99A8MXY4 864 aaPredicted RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 KLF4O43474 513 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 CSO75390 466 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 SLC2A10O95528 541 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 CELA2AP08217 269 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 AHCYP23526 432 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 RPS18P62269 152 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 SNRPGP62308 76 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 ZNF117Q03924 483 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 PRKCDQ05655 676 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 TUSC1Q2TAM9 212 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 ELOA3BQ3SY89 546 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 FNDC7Q5VTL7 733 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 RPUSD3Q6P087 351 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 C5orf46Q6UWT4 87 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 ZNF440Q8IYI8 595 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 ZNF441Q8N8Z8 693 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 ELOA3Q8NG57 546 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 OR2T33Q8NG76 320 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 OR13F1Q8NGS4 319 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 DNAJA4Q8WW22 397 aaPredicted RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 MUL1Q969V5 352 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 C3orf49Q96BT1 292 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 Q96MT0 163 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 IFT27Q9BW83 186 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 POLDIP3Q9BY77 421 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 SLC26A1Q9H2B4 701 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 HHATLQ9HCP6 504 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 ACOT13Q9NPJ3 140 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 PLCXD1Q9NUJ7 323 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 NCDNQ9UBB6 729 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 NXT1Q9UKK6 140 aaKnown RBP7.03□□□□□ -1.28
SOX6-211ENST00000528429 ZNF318Q5VUA4 2279 aa7.03□□□□□ -1.28
SOX6-211ENST00000528429 NUP210LQ5VU65 1888 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 DMXL1Q9Y485 3027 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 FAM183AA6NL82 134 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 TTLL8A6PVC2 850 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 TO15178 435 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 SEC14L2O76054 403 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 CDK1P06493 297 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 JUNBP17275 347 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 PNLIPRP2P54317 469 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 GP2P55259 537 aaKnown RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 GALK2Q01415 458 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ZNF91Q05481 1191 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 TOMM34Q15785 309 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 ISXQ2M1V0 245 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 PGGHGQ32M88 737 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 SYT14P1Q58G82 188 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 C3orf38Q5JPI3 329 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 TMEM205Q6UW68 189 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ARSKQ6UWY0 536 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 THSD4Q6ZMP0 1018 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 IGFN1Q86VF2 1251 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 OR8H3Q8N146 312 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 SUMF1Q8NBK3 374 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 SLC37A3Q8NCC5 494 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 DUSP19Q8WTR2 217 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 TRUB1Q8WWH5 349 aaKnown RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 ZNF524Q96C55 264 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ZNF486Q96H40 463 aaPredicted RBP7.02□□□□□ -1.29
SOX6-211ENST00000528429 DEFB126Q9BYW3 111 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 PRRG3Q9BZD7 231 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 SEMA4CQ9C0C4 833 aa7.02□□□□□ -1.29
SOX6-211ENST00000528429 ACTR6Q9GZN1 396 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms