RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 UBE2NP61088 152 aaKnown RBP13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 NAAAQ02083 359 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 HGFACQ04756 655 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 GGTLC2Q14390 218 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 MSANTD1Q6ZTZ1 278 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 ABHD12BQ7Z5M8 362 aaPredicted RBP13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 CROCCP2Q86T23 111 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 MYPOPQ86VE0 399 aaPredicted RBP13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 MSRB3Q8IXL7 192 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 C10orf111Q8N326 155 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 MIER2Q8N344 545 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 BEX2Q9BXY8 128 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 BCL2L10Q9HD36 194 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 A4GALTQ9NPC4 353 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 OBP2BQ9NPH6 170 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 CA10Q9NS85 328 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 SLC25A37Q9NYZ2 338 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 B3GAT1Q9P2W7 334 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 IFT52Q9Y366 437 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 CUBNO60494 3623 aa13.5□□□□□ -0.25
CLNS1A-210ENST00000528364 SLC35F4A4IF30 521 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 TMEM247A6NEH6 219 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF503-AS2A6NEH8 195 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 PHF1O43189 567 aaPredicted RBP13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 TPST1O60507 370 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 OR4A8P0C604 315 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 HOXB9P17482 250 aaPredicted RBP13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 HTR2AP28223 471 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 PDLIM4P50479 330 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 SRSF2Q01130 221 aaKnown RBP13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 ADIPOQQ15848 244 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 C1QTNF12Q5T7M4 302 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 EPGNQ6UW88 154 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 IL17RELQ6ZVW7 336 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 FUNDC1Q8IVP5 155 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 ZCCHC24Q8N2G6 241 aaKnown RBP13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 OXGR1Q96P68 337 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 KCNS3Q9BQ31 491 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 ARMC7Q9H6L4 198 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 GPR35Q9HC97 309 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 NKIRAS1Q9NYS0 192 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 CRNNQ9UBG3 495 aaPredicted RBP13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 USH1CQ9Y6N9 552 aa13.49□□□□□ -0.25
CLNS1A-210ENST00000528364 IGKV1D-42A0A075B6H8 117 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 A0A096LPI6 279 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 ARPC4-TTLL3A0A0A6YYG9 625 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 IGHV4-61A0A0C4DH41 118 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 A0A1B0GWA3 101 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 M0R082 166 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 LMX1BO60663 402 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 IGLV1-44P01699 117 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 CRYAAP02489 173 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 CSF3P09919 207 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 BMP2P12643 396 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF43P17038 809 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 GRPRP30550 384 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 NR4A2P43354 598 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 SLC18A1P54219 525 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 GLIPR1L2Q4G1C9 344 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 PHYHD1Q5SRE7 291 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 SLC46A3Q7Z3Q1 461 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 NFKBIDQ8NI38 313 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 BBS10Q8TAM1 723 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF417Q8TAU3 575 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF587Q96SQ5 575 aaPredicted RBP13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 WFDC6Q9BQY6 131 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 KATNB1Q9BVA0 655 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 CACYBPQ9HB71 228 aaKnown RBP13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 TMBIM4Q9HC24 238 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 THUMPD1Q9NXG2 353 aaKnown RBP13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 CDC42EP3Q9UKI2 254 aa13.48□□□□□ -0.25
CLNS1A-210ENST00000528364 OR6C65A6NJZ3 312 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 B9A039 149 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 C5orf58C9J3I9 102 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 MS4A18H0YCH9 400 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 ZNF500O60304 480 aaPredicted RBP13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 SEC14L2O76054 403 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 HPRP00739 348 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 CBR1P16152 277 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 IGFBP5P24593 272 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 THBS4P35443 961 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 IDH3GP51553 393 aaPredicted RBP13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 C1DQ13901 141 aaKnown RBP13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 CEACAM16Q2WEN9 425 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 MS4A18Q3C1V0 323 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 PAGE3Q5JUK9 113 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 CARD17Q5XLA6 110 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 WDFY1Q8IWB7 410 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 MAGEE2Q8TD90 523 aaPredicted RBP13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 TMEM158Q8WZ71 300 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 MSI2Q96DH6 328 aaKnown RBP13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 SHARPINQ9H0F6 387 aa13.47□□□□□ -0.25
CLNS1A-210ENST00000528364 PLK3Q9H4B4 646 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms