RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 AKR1E2Q96JD6 320 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 RIT2Q99578 217 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 POTEKPQ9BYX7 375 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 PRRG3Q9BZD7 231 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 KAT8Q9H7Z6 458 aaKnown RBP4.74□□□□□ -1.65
PCF11-202ENST00000528336 MED17Q9NVC6 651 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 NKIRAS1Q9NYS0 192 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 RBAKQ9NYW8 714 aaPredicted RBP4.74□□□□□ -1.65
PCF11-202ENST00000528336 ADA2Q9NZK5 511 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 LCMT1Q9UIC8 334 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 PITPNC1Q9UKF7 332 aa4.74□□□□□ -1.65
PCF11-202ENST00000528336 SCN9AQ15858 1988 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 WDR90Q96KV7 1748 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 SMCO3A2RU48 225 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 SERINC4A6NH21 518 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 NKX6-3A6NJ46 265 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 LRRC30A6NM36 301 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 SIGLEC5O15389 551 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 LATO43561 262 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 TRAPPC3O43617 180 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 ATP5HO75947 161 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 STK17BO94768 372 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 NXPH4O95158 308 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 PNMA6AP0CW24 399 aaPredicted RBP4.73□□□□□ -1.65
PCF11-202ENST00000528336 ACADSP16219 412 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 STOMP27105 288 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 GPR183P32249 361 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 EPHX2P34913 555 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 NPY2RP49146 381 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 LIMK2P53671 638 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 PLA2G16P53816 162 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 CD300CQ08708 224 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 PPIDQ08752 370 aaKnown RBP4.73□□□□□ -1.65
PCF11-202ENST00000528336 GK3PQ14409 553 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 HEPACAMQ14CZ8 416 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 THEM4Q5T1C6 240 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 KCNIP4Q6PIL6 250 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 ZNF841Q6ZN19 808 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 GCNT7Q6ZNI0 430 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 USP50Q70EL3 339 aaPredicted RBP4.73□□□□□ -1.65
PCF11-202ENST00000528336 SNX20Q7Z614 316 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 TBC1D10CQ8IV04 446 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 LRRC34Q8IZ02 419 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 SLC38A6Q8IZM9 456 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 OR9Q2Q8NGE9 314 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 OR8J2Q8NGG1 315 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 OR51L1Q8NGJ5 315 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 OR9G4Q8NGQ1 327 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 WDR36Q8NI36 951 aaKnown RBP4.73□□□□□ -1.65
PCF11-202ENST00000528336 LRRC15Q8TF66 581 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 SEPT8Q92599 483 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 SOSTQ9BQB4 213 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 TMEM246Q9BRR3 403 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 ROGDIQ9GZN7 287 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 ILKAPQ9H0C8 392 aaPredicted RBP4.73□□□□□ -1.65
PCF11-202ENST00000528336 GOLPH3Q9H4A6 298 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 MYOZ2Q9NPC6 264 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 MS4A12Q9NXJ0 267 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 SLC39A1Q9NY26 324 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 PSMC3IPQ9P2W1 217 aaPredicted RBP4.73□□□□□ -1.65
PCF11-202ENST00000528336 KLK11Q9UBX7 282 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 PHF11Q9UIL8 331 aa4.73□□□□□ -1.65
PCF11-202ENST00000528336 UMODL1Q5DID0 1318 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 IGHV4-30-2A0A087WSY4 118 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 IQCMA0A1B0GVH7 501 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 A0A1W2PNV4 684 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 A0A1W2PQ72 361 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 TEX46H3BTG2 121 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 GOLGA8RI6L899 631 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 DLGAP1O14490 977 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 GPAA1O43292 621 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 TSPAN2O60636 221 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 TPST2O60704 377 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 NOL4O94818 638 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 DCNP07585 359 aaKnown RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 ATP1B2P14415 290 aaPredicted RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 SELEP16581 610 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 CAPN2P17655 700 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 MMP11P24347 488 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 GJB2P29033 226 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 IL12BP29460 328 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 HNRNPH3P31942 346 aaKnown RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 FEN1P39748 380 aaKnown RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 P2RY2P41231 377 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 SLC7A2P52569 658 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 EMP2P54851 167 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 ERVK-16P61578 105 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 VBP1P61758 197 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 HERVK_113P63132 956 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 ERVK-8P63133 956 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 MFGE8Q08431 387 aaPredicted RBP4.72□□□□□ -1.65
PCF11-202ENST00000528336 GRB14Q14449 540 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 MEF2DQ14814 521 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 MAPRE2Q15555 327 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 MS4A18Q3C1V0 323 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 GGTA1PQ4G0N0 100 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 CDC42EP5Q6NZY7 148 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 VITQ6UXI7 678 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 HSDL2Q6YN16 418 aa4.72□□□□□ -1.65
PCF11-202ENST00000528336 C17orf107Q6ZR85 190 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms