RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 OR10A3P58181 314 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ERVFC1-1P60608 527 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ARF6P62330 175 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SIM1P81133 766 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 EFNB1P98172 346 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SPIBQ01892 262 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 BDH1Q02338 343 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 RING1Q06587 406 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SRSF4Q08170 494 aaKnown RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 FZD5Q13467 585 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 TTLL4Q14679 1199 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 MELKQ14680 651 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 HEPACAMQ14CZ8 416 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 RBBP7Q16576 425 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ATP6V1FQ16864 119 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 GOLGA7BQ2TAP0 167 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 FAM174BQ3ZCQ3 159 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 KHDC3LQ587J8 217 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OTUD1Q5VV17 481 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 ZDHHC20Q5W0Z9 365 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ADNP2Q6IQ32 1131 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 GRHL2Q6ISB3 625 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 TRNP1Q6NT89 227 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 FAHD2BQ6P2I3 314 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 SLC22A25Q6T423 547 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 IL20RBQ6UXL0 311 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 NHLRC1Q6VVB1 395 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 HEPN1Q6WQI6 88 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ACOT7LQ6ZUV0 252 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SLC35D2Q76EJ3 337 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ZNF551Q7Z340 670 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 CACUL1Q86Y37 369 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 FOXRED2Q8IWF2 684 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ZNF664Q8N3J9 261 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 FAM26EQ8N5C1 309 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 TMEM104Q8NE00 496 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR1J1Q8NGS3 322 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR10R2Q8NGX6 335 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR51Q1Q8NH59 317 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 STAG3L4Q8TBR4 150 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SLC7A13Q8TCU3 470 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 RNASE8Q8TDE3 154 aaKnown RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 PAQR8Q8TEZ7 354 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 HPSE2Q8WWQ2 592 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 PHYHIPQ92561 330 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 THRSPQ92748 146 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SLC25A28Q96A46 364 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 MVB12AQ96EY5 273 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 FAHD2AQ96GK7 314 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ADAD1Q96M93 576 aaKnown RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 PACRGQ96M98 296 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 AMDHD1Q96NU7 426 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR5B2Q96R09 309 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR1F2PQ96R84 312 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR52E6Q96RD3 313 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ATOH8Q96SQ7 321 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 INTS14Q96SY0 518 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 NIPSNAP1Q9BPW8 284 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 AARSD1Q9BTE6 412 aaKnown RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 DOHHQ9BU89 302 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 JAM3Q9BX67 310 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 DUSP16Q9BY84 665 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 FAM124BQ9H5Z6 455 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 CWH43Q9H720 699 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 KIR3DX1Q9H7L2 352 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 RHOFQ9HBH0 211 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 GBA2Q9HCG7 927 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 THSD1Q9NS62 852 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 MARCH5Q9NX47 278 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ABRACLQ9P1F3 81 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 DNAJB11Q9UBS4 358 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 KCNE5Q9UJ90 142 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 TNFSF18Q9UNG2 199 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 CORO2BQ9UQ03 480 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ZFP30Q9Y2G7 519 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ADAM18Q9Y3Q7 739 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 UBIAD1Q9Y5Z9 338 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 DSPPQ9NZW4 1301 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 TRAV14DV4A0A0A6YYC5 116 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 TRBV11-1A0A0K0K1C0 115 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 C20orf202A1L168 122 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 CPED1A4D0V7 1026 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 C7orf77A4D0Y5 90 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 DRGXA6NNA5 263 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 MEIS3P2A8K0S8 358 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SUPT3HB4E1H0 165 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 F8VVB4 439 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 F8VWA3 439 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 RFXANKO14593 260 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SYT7O43581 403 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SOX15O60248 233 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 KLK8O60259 260 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 TMEM127O75204 238 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 CLDN11O75508 207 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 ADAP1O75689 374 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 NCR1O76036 304 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 SCAF4O95104 1147 aaKnown RBP5.34□□□□□ -1.55
CD44-225ENST00000527326 AIFM1O95831 613 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 CD74P04233 296 aa5.34□□□□□ -1.55
CD44-225ENST00000527326 APODP05090 189 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms