RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SCAND1P57086 179 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2B8PP59922 312 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NANOS2P60321 138 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 UBE2G2P60604 165 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MAXP61244 160 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ERVS71-1P61550 626 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 RPS27AP62979 156 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 UBA52P62987 128 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PPP3R1P63098 170 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 EIF5AP63241 154 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CSNK1G2P78368 415 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 DLK1P80370 383 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SHC2P98077 582 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OGDHQ02218 1023 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 HYAL1Q12794 435 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TCP10Q12799 353 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PLA2G7Q13093 441 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GTF2H2Q13888 395 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ARL6IP1Q15041 203 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC9A3R2Q15599 337 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 FAM187BQ17R55 369 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SOWAHAQ2M3V2 549 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 HNRNPA1L2Q32P51 320 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 RFTN2Q52LD8 501 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PYCR3Q53H96 274 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ARHGAP15Q53QZ3 475 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SPIN4Q56A73 249 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MESTQ5EB52 335 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 C1orf141Q5JVX7 400 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 Q5PR19 223 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OTUD1Q5VV17 481 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM244Q5VVB8 128 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NSUN5P2Q63ZY6 315 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF470Q6ECI4 717 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR52W1Q6IF63 320 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D3CQ6IPX1 549 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CAPN13Q6MZZ7 669 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MRNIPQ6NTE8 343 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 H3F3CQ6NXT2 135 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GTF2H2CQ6P1K8 395 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 DNAJC24Q6P3W2 148 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MOXD1Q6UVY6 613 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PRSS55Q6UWB4 352 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM108Q6UXF1 575 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZCCHC23Q6ZST2 131 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 DPPA4Q7L190 304 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF367Q7RTV3 350 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PLPPR4Q7Z2D5 763 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 WDR53Q7Z5U6 358 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM135Q86UB9 458 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TSPAN33Q86UF1 283 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CATSPERDQ86XM0 798 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CACUL1Q86Y37 369 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 KLHDC8BQ8IXV7 354 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D3Q8IZP1 549 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF444Q8N0Y2 327 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GPC2Q8N158 579 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 RTL3Q8N8U3 475 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MRPL43Q8N983 215 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PNLDC1Q8NA58 520 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 BHLHE23Q8NDY6 225 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 BEST4Q8NFU0 473 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR56A4Q8NGH8 313 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR13C8Q8NGS7 320 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR6K3Q8NGY3 331 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR8U1Q8NH10 309 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2L2Q8NH16 312 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR10A6Q8NH74 314 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 C16orf52Q8NHV5 167 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF564Q8TBZ8 553 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM163Q8TC26 289 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MAPK15Q8TD08 544 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NPRL2Q8WTW4 380 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TSEN15Q8WW01 171 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 KCNE4Q8WWG9 221 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PHYHIPQ92561 330 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CNOT9Q92600 299 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 RAD54LQ92698 747 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TFGQ92734 400 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GHSRQ92847 366 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 POP5Q969H6 163 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ARSGQ96EG1 525 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZBED6CLQ96FA7 236 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OTUB1Q96FW1 271 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 EEF2KMTQ96G04 330 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CERS2Q96G23 380 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ADGRG7Q96K78 797 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 LYZL4Q96KX0 146 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SAMD8Q96LT4 415 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 C12orf66Q96MD2 445 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM56Q96MV1 263 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 FOXN4Q96NZ1 517 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GFM1Q96RP9 751 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC22A12Q96S37 553 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PARK7Q99497 189 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 S100A13Q99584 98 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PHB2Q99623 299 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SMAD5Q99717 465 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 WDR83Q9BRX9 315 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms