RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 REP15Q6BDI9 236 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZCCHC12Q6PEW1 402 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 PAPD4Q6PIY7 484 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 TMEM107Q6UX40 140 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 DLEU7Q6UYE1 221 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 HACD2Q6Y1H2 254 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CCDC121Q6ZUS5 278 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 C6orf120Q7Z4R8 191 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 DHDDSQ86SQ9 333 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 GPAT4Q86UL3 456 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 VASH2Q86V25 355 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 LINC00346Q8IVM7 164 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CLEC4FQ8N1N0 589 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 NFAM1Q8NET5 270 aaPredicted RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 GJC3Q8NFK1 279 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 B3GNT7Q8NFL0 401 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 OR7G1Q8NGA0 311 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 OR11G2Q8NGC1 345 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 OR5L2Q8NGL0 311 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 PSMA8Q8TAA3 256 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 FBXO30Q8TB52 745 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZNF675Q8TD23 568 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZNF721Q8TF20 911 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZFP90Q8TF47 636 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ROPN1LQ96C74 230 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 C8orf44Q96CB5 159 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 RCN3Q96D15 328 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZC3HAV1LQ96H79 300 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 IMMP1LQ96LU5 166 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 FER1L6-AS2Q96M78 137 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ANKRD27Q96NW4 1050 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CCNL2Q96S94 520 aaPredicted RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 CITED2Q99967 270 aaPredicted RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 SLC35A5Q9BS91 424 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 NUDT9Q9BW91 350 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 OR8D2Q9GZM6 311 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ANKRA2Q9H9E1 313 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZNF160Q9HCG1 818 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZCCHC3Q9NUD5 404 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 DDX18Q9NVP1 670 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.05□□□□□ -1.76
USP48-211ENST00000526044 P4HTMQ9NXG6 502 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 PPP1R14DQ9NXH3 145 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 NDE1Q9NXR1 346 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 MAT2BQ9NZL9 334 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 OR6C3Q9NZP0 311 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 VAPAQ9P0L0 249 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 KIAA1456Q9P272 454 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 SLC25A10Q9UBX3 287 aaPredicted RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 PRODH2Q9UF12 536 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 ZNF639Q9UID6 485 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 FAF1Q9UNN5 650 aaPredicted RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 ERVK-19Q9WJR5 959 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CFL2Q9Y281 166 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 CARD8Q9Y2G2 431 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 AP3M1Q9Y2T2 418 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 L3MBTL1Q9Y468 752 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 LRP12Q9Y561 859 aa4.05□□□□□ -1.76
USP48-211ENST00000526044 MRPS18BQ9Y676 258 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 RIF1Q5UIP0 2472 aaKnown RBP4.05□□□□□ -1.76
USP48-211ENST00000526044 ZNF292O60281 2723 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 RNF103-CHMP3A0A140T963 221 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 C2orf92A0A1B0GVN3 265 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 SAGE2PA6NJ88 616 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 OR6C76A6NM76 312 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 HSPB2A8KAH6 182 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 A8MUI8 341 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 FAM25EA8MYX2 175 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 GYG2O15488 501 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 HNRNPCL1O60812 293 aaKnown RBP4.04□□□□□ -1.76
USP48-211ENST00000526044 RGS11O94810 467 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 HPP00738 406 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 HMGN2P05204 90 aaKnown RBP4.04□□□□□ -1.76
USP48-211ENST00000526044 IFI6P09912 130 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ALOX5P09917 674 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 COX6A1P12074 109 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ZNF12P17014 697 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 DRD5P21918 477 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CRATP43155 626 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 MAGEA8P43361 318 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 NUDT2P50583 147 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 GPR143P51810 404 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ART1P52961 327 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CASP9P55211 416 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 PSME3P61289 254 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CBX3Q13185 183 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ITGADQ13349 1161 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CAPRIN1Q14444 709 aaKnown RBP4.04□□□□□ -1.76
USP48-211ENST00000526044 EXOSC7Q15024 291 aaKnown RBP4.04□□□□□ -1.76
USP48-211ENST00000526044 MED22Q15528 200 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ZNHIT3Q15649 155 aaPredicted RBP4.04□□□□□ -1.76
USP48-211ENST00000526044 HSPB2Q16082 182 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 TRMT5Q32P41 509 aaKnown RBP4.04□□□□□ -1.76
USP48-211ENST00000526044 ESCO2Q56NI9 601 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 LRIF1Q5T3J3 769 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 FHL5Q5TD97 284 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 NANOGP8Q6NSW7 305 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 TMEM81Q6P7N7 255 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms