RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 IFNGR1P15260 489 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 NCF2P19878 526 aaPredicted RBP5.71□□□□□ -1.5
CD44-221ENST00000526000 CBLP22681 906 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 UQCRC2P22695 453 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 CXCR1P25024 350 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 COL8A2P25067 703 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 CFPP27918 469 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 S100A3P33764 101 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 CAPZA2P47755 286 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 IDH3GP51553 393 aaPredicted RBP5.71□□□□□ -1.5
CD44-221ENST00000526000 POLR2HP52434 150 aaKnown RBP5.71□□□□□ -1.5
CD44-221ENST00000526000 SLC16A1P53985 500 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 GYS2P54840 703 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 ARF1P84077 181 aaKnown RBP5.71□□□□□ -1.5
CD44-221ENST00000526000 H3F3AP84243 136 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 NAAAQ02083 359 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 FUT5Q11128 374 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 NPRL3Q12980 569 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 ADRM1Q16186 407 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 FAM91A1Q658Y4 838 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 NIPAL3Q6P499 406 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 SSX8Q7RTT4 187 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 MYPOPQ86VE0 399 aaPredicted RBP5.71□□□□□ -1.5
CD44-221ENST00000526000 RNF130Q86XS8 419 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 VRK2Q86Y07 508 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 TRIML2Q8N7C3 387 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 LINC01356Q8N9X3 169 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 CCDC197Q8NCU1 140 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 OR9K2Q8NGE7 335 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 OR1K1Q8NGR3 316 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 PNPT1Q8TCS8 783 aaKnown RBP5.71□□□□□ -1.5
CD44-221ENST00000526000 UBASH3BQ8TF42 649 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 DDIT4LQ96D03 193 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 SLC38A2Q96QD8 506 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 RAB1BQ9H0U4 201 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 ZNF385DQ9H6B1 395 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 CA10Q9NS85 328 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 TREM2Q9NZC2 230 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 BTNL2Q9UIR0 455 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 METRNQ9UJH8 293 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 FZR1Q9UM11 496 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 TRAPPC4Q9Y296 219 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 SLC35A3Q9Y2D2 325 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 SLC9A8Q9Y2E8 581 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 CAPN7Q9Y6W3 813 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 ARFGEF3Q5TH69 2177 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 TMEM129A0AVI4 362 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CFAP73A6NFT4 308 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 LIPT2A6NK58 231 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 NDUFS8O00217 210 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 WNT9BO14905 357 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 KCNAB3O43448 404 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 SPRY1O43609 319 aaPredicted RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 EIF1BO60739 113 aaKnown RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 AK1P00568 194 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 GPIP06744 558 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CHRM4P08173 479 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CECR9P0C854 216 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 NR2F1P10589 423 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 PRG2P13727 222 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 IL7RP16871 459 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 NPR2P20594 1047 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 PRDX6P30041 224 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 THBS2P35442 1172 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 SLC1A3P43003 542 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CLK1P49759 484 aaKnown RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 MNAT1P51948 309 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 POLR2JP52435 117 aaKnown RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 CHN2P52757 468 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CLDN17P56750 224 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 UFM1P61960 85 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 HPCAP84074 193 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 HOXC5Q00444 222 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 IL1RL1Q01638 556 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 ROR2Q01974 943 aaKnown RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 PIGFQ07326 219 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 ALKBH6Q3KRA9 238 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 SPANXN4Q5MJ08 99 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 COX20Q5RI15 118 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CARD17Q5XLA6 110 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 KRT80Q6KB66 452 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 BLOC1S3Q6QNY0 202 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 ZNF621Q6ZSS3 439 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CDK20Q8IZL9 346 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 RFLNBQ8N5W9 214 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 RP9Q8TA86 221 aaKnown RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 BCAS4Q8TDM0 211 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 PMM1Q92871 262 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CMTM5Q96DZ9 223 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 ZNF837Q96EG3 531 aaPredicted RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 ITCHQ96J02 903 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CCDC115Q96NT0 180 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 ALKBH3Q96Q83 286 aaPredicted RBP5.7□□□□□ -1.5
CD44-221ENST00000526000 LRRC37BQ96QE4 947 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 DOK1Q99704 481 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 SLC35A5Q9BS91 424 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 TAPBPLQ9BX59 468 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 FAM107BQ9H098 131 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 RAD21L1Q9H4I0 556 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 DYNLRB1Q9NP97 96 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms