RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 MOB4Q9Y3A3 225 aa3.43□□□□□ -1.86
CSDE1-211ENST00000525970 CDHR2Q9BYE9 1310 aa3.43□□□□□ -1.86
CSDE1-211ENST00000525970 HCFC1P51610 2035 aa3.43□□□□□ -1.86
CSDE1-211ENST00000525970 USP47Q96K76 1375 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 SMIM28A0A1B0GU29 152 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 K7N7A8 449 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 EIF3HO15372 352 aaKnown RBP eCLIP3.42□□□□□ -1.86
CSDE1-211ENST00000525970 PHF1O43189 567 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-211ENST00000525970 GPAA1O43292 621 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 TOM1O60784 492 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 OTCP00480 354 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 IGHV2-5P01817 119 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 ZP3P21754 424 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 VDAC1P21796 283 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 TUBG1P23258 451 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 STOMP27105 288 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 AQP1P29972 269 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 IFNA8P32881 189 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 RPL34P49207 117 aaKnown RBP3.42□□□□□ -1.86
CSDE1-211ENST00000525970 RAB10P61026 200 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 PAX5Q02548 391 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 CD47Q08722 323 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 ARL6IP1Q15041 203 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 LRRC36Q1X8D7 754 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 HSDL1Q3SXM5 330 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 C11orf71Q6IPW1 123 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 WDR74Q6RFH5 385 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-211ENST00000525970 HSDL2Q6YN16 418 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 CERS6Q6ZMG9 384 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 DNM1P46Q6ZS02 220 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 ASCL5Q7RTU5 278 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 NRMQ8IXM6 262 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 OR52I1Q8NGK6 324 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 OR13F1Q8NGS4 319 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 MARCH1Q8TCQ1 289 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 PYROXD1Q8WU10 500 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 GIMAP1Q8WWP7 306 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 MS4A4EQ96PG1 132 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 OR5M11Q96RB7 305 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 SOSTQ9BQB4 213 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 OR51M1Q9H341 326 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 LYRM4Q9HD34 91 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 TUBG2Q9NRH3 451 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.42□□□□□ -1.86
CSDE1-211ENST00000525970 C20orf96Q9NUD7 363 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-211ENST00000525970 GPATCH2LQ9NWQ4 482 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 POGZQ7Z3K3 1410 aa3.42□□□□□ -1.86
CSDE1-211ENST00000525970 IGLV3-22A0A075B6J6 115 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 LSM1O15116 133 aaKnown RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 MBTPS2O43462 519 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 ZNF354AO60765 605 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 CRYGCP07315 174 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 ABOP16442 354 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 ZNF24P17028 368 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 GSTM3P21266 225 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 FASP25445 335 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 ANXA13P27216 316 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 TFPI2P48307 235 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 SLC25A1P53007 311 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 IRX3P78415 501 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 MRPS22P82650 360 aaKnown RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 MS4A2Q01362 244 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 IRF8Q02556 426 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 TLE4Q04727 773 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 LIPEQ05469 1076 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 ZFP36L1Q07352 338 aaKnown RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 EGFEM1PQ0D2K5 195 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 TMED1Q13445 227 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 PARP15Q460N3 678 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 NKAIN1Q4KMZ8 207 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 HIKESHIQ53FT3 197 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 VAX1Q5SQQ9 334 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 UNQ9370/PRO34162Q6UXP9 181 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 RDH10Q8IZV5 341 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 C6orf223Q8N319 242 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 FTMTQ8N4E7 242 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 POM121L12Q8N7R1 296 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 FBXL13Q8NEE6 735 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 RASL10AQ92737 203 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 FGF11Q92914 225 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 C8orf44Q96CB5 159 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 CMTM7Q96FZ5 175 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 VSIG2Q96IQ7 327 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 PRRC1Q96M27 445 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 CFAP53Q96M91 514 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 APOL2Q9BQE5 337 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 RIOK1Q9BRS2 568 aaKnown RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 TEKT3Q9BXF9 490 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 C20orf85Q9H1P6 137 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 ELOVL6Q9H5J4 265 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 LYARQ9NX58 379 aaKnown RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 GIN1Q9NXP7 522 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 N6AMT1Q9Y5N5 214 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 KIF27Q86VH2 1401 aa3.41□□□□□ -1.86
CSDE1-211ENST00000525970 PHF3Q92576 2039 aaKnown RBP3.41□□□□□ -1.86
CSDE1-211ENST00000525970 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 A0A087WWV3 80 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 TRBV9A0A0B4J1U6 114 aa3.4□□□□□ -1.87
CSDE1-211ENST00000525970 IGHV7-81A0A0B4J1V7 117 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms