RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ADPRHL2Q9NX46 363 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 SH3GLB1Q9Y371 365 aa11.06□□□□□ -0.64
SMCO4-202ENST00000525141 A0A0B4J2E0 115 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 A0A1B0GX12 115 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 ELOA3DA6NLF2 546 aaPredicted RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 M0R3H8 397 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 OVOL3O00110 214 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 HS3ST1O14792 307 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 EIF1BO60739 113 aaKnown RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 NPIPB7O75200 414 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 GMNNO75496 209 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 LYZL6O75951 148 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 IGHV3-9P01782 118 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 INHBBP09529 407 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 DANCRP0C864 163 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 PTH2RP49190 550 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 SLC16A1P53985 500 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 OR2B6P58173 313 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 NPTX1Q15818 432 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 ELOA3BQ3SY89 546 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 LRRC23Q53EV4 343 aaPredicted RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 Q5PR19 223 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 LINC00114Q6XXX2 140 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 CBLL1Q75N03 491 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 GALNT5Q7Z7M9 940 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 P3H2Q8IVL5 708 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 RNF148Q8N7C7 305 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 ZIC4Q8N9L1 334 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 ELOA3Q8NG57 546 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 OR4D11Q8NGI4 311 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 KISS1RQ969F8 398 aaPredicted RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 KCTD12Q96CX2 325 aaKnown RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 PERPQ96FX8 193 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 TACO1Q9BSH4 297 aaKnown RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 GSX2Q9BZM3 304 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 POLR2J2Q9GZM3 115 aaKnown RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 POLR2J3Q9H1A7 115 aaKnown RBP11.05□□□□□ -0.64
SMCO4-202ENST00000525141 FANCFQ9NPI8 374 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 TAS2R1Q9NYW7 299 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 SELENONQ9NZV5 590 aa11.05□□□□□ -0.64
SMCO4-202ENST00000525141 A0A087WUJ7 227 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 ARHGEF9O43307 516 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 LY6G6DO95868 133 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 CD8AP01732 235 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 COX5AP20674 150 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 IL32P24001 234 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 NR1H2P55055 460 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 CDH12P55289 794 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 SLC35A1P78382 337 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 EGR4Q05215 589 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 BNIP2Q12982 314 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 ENTPD8Q5MY95 495 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 FBXW9Q5XUX1 488 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 RINLQ6ZS11 566 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 YTHDF3Q7Z739 585 aaKnown RBP11.04□□□□□ -0.64
SMCO4-202ENST00000525141 CARM1Q86X55 608 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 RBM45Q8IUH3 476 aaKnown RBP11.04□□□□□ -0.64
SMCO4-202ENST00000525141 VANGL1Q8TAA9 524 aaPredicted RBP11.04□□□□□ -0.64
SMCO4-202ENST00000525141 ADAMTS16Q8TE57 1224 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 FAM162AQ96A26 154 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 ZHX1-C8orf76Q96EF9 292 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 TPD52L3Q96J77 140 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 Q96MF0 132 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 MUS81Q96NY9 551 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 DCAF13Q9NV06 445 aaKnown RBP11.04□□□□□ -0.64
SMCO4-202ENST00000525141 NPAP1Q9NZP6 1156 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 EGFL7Q9UHF1 273 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 MAGEL2Q9UJ55 1249 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 RPS6KA6Q9UK32 745 aa11.04□□□□□ -0.64
SMCO4-202ENST00000525141 FN1P02751 2386 aaKnown RBP11.04□□□□□ -0.64
SMCO4-202ENST00000525141 TRAPPC13A5PLN9 417 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 TRIM64A6NGJ6 449 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 TRIM64BA6NI03 449 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 LIPT2A6NK58 231 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 PDLIM1O00151 329 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 CHP2O43745 196 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 OR2T1O43869 369 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 UBOX5O94941 541 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 CNOT4O95628 575 aaKnown RBP11.03□□□□□ -0.64
SMCO4-202ENST00000525141 SERPINA1P01009 418 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 GPIP06744 558 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 SOD3P08294 240 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 THRBP10828 461 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 NCK1P16333 377 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 TCN1P20061 433 aaPredicted RBP11.03□□□□□ -0.64
SMCO4-202ENST00000525141 IDUAP35475 653 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 OR1E2P47887 323 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 P2RY4P51582 365 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 BSPH1Q075Z2 132 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 CEACAM7Q14002 265 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 SLC17A1Q14916 467 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 PGGHGQ32M88 737 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 KRTAP21-3Q3LHN1 58 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 C1orf140Q5VVS0 124 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 BIVMQ86UB2 503 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 ZNF100Q8IYN0 542 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 TMEM99Q8N816 258 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 WDR31Q8NA23 367 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms