RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MRPL39Q9NYK5 338 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 TAS2R16Q9NYV7 291 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ACTR3BQ9P1U1 418 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 GMPR2Q9P2T1 348 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 STX18Q9P2W9 335 aaKnown RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF229Q9UJW7 825 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 RCE1Q9Y256 329 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM5Q9Y2B1 443 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 TESMINQ9Y4I5 508 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 FLVCR1Q9Y5Y0 555 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 ENPP4Q9Y6X5 453 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 V9GYQ6 96 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 HIVEP3Q5T1R4 2406 aa4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 NUP214P35658 2090 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P40-201ENST00000525121 NCOA6Q14686 2063 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 LOC102725191A0A1B0GVB3 256 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 A0A1W2PRG6 482 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 A6NNC1 897 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 EFCAB9A8MZ26 197 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF814B7Z6K7 855 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 C11orf98E9PRG8 122 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 BLOC1S5-TXNDC5H3BN57 136 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 hCG_2039718K7EN88 272 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 PLPP3O14495 311 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RNF13O43567 381 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RAMP1O60894 148 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RAD51DO75771 328 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 SERPINI2O75830 405 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 LYZL6O75951 148 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 PDE5AO76074 875 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR7A10O76100 309 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 UBOX5O94941 541 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 IGF2P01344 180 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 BGLAPP02818 100 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 FABP3P05413 133 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 NR2C1P13056 603 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 IFI30P13284 250 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RHCEP18577 417 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 IFNGR2P38484 337 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 YAP1P46937 504 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 DAP3P51398 398 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 SH3BGRP55822 239 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 UBE2NP61088 152 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 SPIBQ01892 262 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 POU3F1Q03052 451 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 SNTB1Q13884 538 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 DAZAP2Q15038 168 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF74Q16587 644 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 FAM98BQ52LJ0 330 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 BEX5Q5H9J7 111 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 SFRP5Q5T4F7 317 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 C1QTNF12Q5T7M4 302 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ANKRD34AQ69YU3 496 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 HMBOX1Q6NT76 420 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 KLHL17Q6TDP4 642 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 CYP2R1Q6VVX0 501 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 LINC00114Q6XXX2 140 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 STAC2Q6ZMT1 411 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 WDR88Q6ZMY6 472 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RINLQ6ZS11 566 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 CREB3L2Q70SY1 520 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 PXKQ7Z7A4 578 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 WFDC8Q8IUA0 241 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RNF113BQ8IZP6 322 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 GABRG1Q8N1C3 465 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 C17orf78Q8N4C9 275 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 C1orf162Q8NEQ5 155 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 OR6N1Q8NGY5 312 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMEM255BQ8WV15 326 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ACOT11Q8WXI4 607 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 HSD17B8Q92506 261 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 S100PBPQ96BU1 408 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 BPIFA2Q96DR5 249 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ASB9Q96DX5 294 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ADAD1Q96M93 576 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 MOGAT1Q96PD6 335 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF347Q96SE7 839 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 PIP5K1AQ99755 562 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 WFDC6Q9BQY6 131 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 THTPAQ9BU02 230 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ZNF426Q9BUY5 554 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RSPO3Q9BXY4 272 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 POLDIP3Q9BY77 421 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 AMBRA1Q9C0C7 1298 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 CLEC4MQ9H2X3 399 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 MOV10Q9HCE1 1003 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 RHCGQ9UBD6 479 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 MALT1Q9UDY8 824 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 CD300AQ9UGN4 299 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 PRSS50Q9UI38 385 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 ING1Q9UK53 422 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 TMCC3Q9ULS5 477 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 A4GNTQ9UNA3 340 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 MAGED1Q9Y5V3 778 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 DNAJC13O75165 2243 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 PHF3Q92576 2039 aaKnown RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 USP9XQ93008 2570 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 MYO7BQ6PIF6 2116 aa4.78□□□□□ -1.64
HMGB1P40-201ENST00000525121 A0A1W2PRQ8 180 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms