RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 SORCS2Q96PQ0 1159 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 XPO6Q96QU8 1125 aaKnown RBP2.94□□□□□ -1.94
SREK1-208ENST00000520580 OR5B12Q96R08 314 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 LGMNQ99538 433 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 SYT11Q9BT88 431 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 HCAR1Q9BXC0 346 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 TM6SF2Q9BZW4 377 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 NMUR2Q9GZQ4 415 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 NAA50Q9GZZ1 169 aaKnown RBP2.94□□□□□ -1.94
SREK1-208ENST00000520580 NIPAL2Q9H841 368 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 ADAP2Q9NPF8 381 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 GGA2Q9UJY4 613 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 L3MBTL1Q9Y468 752 aa2.94□□□□□ -1.94
SREK1-208ENST00000520580 ERCC6L2Q5T890 1561 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 A0A1B0GW55 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 BMPR1BO00238 502 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 KDELR3O43731 214 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 SNAI1O95863 264 aaPredicted RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4L2P0CJ85 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4L3P0CJ86 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4L4P0CJ87 422 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4L5P0CJ88 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4L6P0CJ89 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4L7P0CJ90 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DDOSTP39656 456 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 MRPL19P49406 292 aaKnown RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 GSK3BP49841 420 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 GPM6AP51674 278 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ERVPABLB-1P60509 514 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DGUOKQ16854 277 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 NSUN5P1Q3KNT7 163 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 XKR4Q5GH76 650 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ANKRD26P1Q6NSI1 321 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4L9Q6RFH8 374 aaPredicted RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 SLC25A48Q6ZT89 311 aaKnown RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 NDUFAF7Q7L592 441 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 RBM45Q8IUH3 476 aaKnown RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 SLC22A18ASQ8N1D0 253 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 TTC29Q8NA56 475 aaPredicted RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 OR13C9Q8NGT0 318 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 LYPD6BQ8NI32 183 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ZBTB9Q96C00 473 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 NRBF2Q96F24 287 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 KCNS3Q9BQ31 491 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 NAT9Q9BTE0 207 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 MFFQ9GZY8 342 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 UPF3AQ9H1J1 476 aaKnown RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 GBA3Q9H227 469 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 PARLQ9H300 379 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 SDF2L1Q9HCN8 221 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 PRSS16Q9NQE7 514 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ZC4H2Q9NQZ6 224 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 NUDT15Q9NV35 164 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 GPATCH2LQ9NWQ4 482 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 B3GNT2Q9NY97 397 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 CHMP5Q9NZZ3 219 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ARMCX1Q9P291 453 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 DUX4Q9UBX2 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 C15orf41Q9Y2V0 281 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 A0A087X002 238 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 GOLGA8QA0A0J9YX86 632 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 TMEM120BA0PK00 339 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 RAB19A4D1S5 217 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 MPTX1A8MV57 137 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ERVV-2B6SEH9 535 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 NR5A2O00482 541 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ACSM4P0C7M7 580 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ATP6V1B2P21281 511 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 PTGDSP41222 190 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 HTR2BP41595 481 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 RPL29P47914 159 aaKnown RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 THBS3P49746 956 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 CCNHP51946 323 aaPredicted RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 DLX5P56178 289 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ACTA2P62736 377 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ACTG2P63267 376 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ACTC1P68032 377 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ACTA1P68133 377 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 MRPS11P82912 194 aaKnown RBP2.93□□□□□ -1.94
SREK1-208ENST00000520580 CD300CQ08708 224 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 CCDC6Q16204 474 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 UFSP1Q6NVU6 142 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 EMBQ6PCB8 327 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 ASCL4Q6XD76 172 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 FAM122BQ7Z309 247 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 C1QL2Q7Z5L3 287 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 COMTD1Q86VU5 262 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 CATSPER3Q86XQ3 398 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 FBXL13Q8NEE6 735 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 OR10H4Q8NGA5 316 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 OR56A4Q8NGH8 313 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 TAF15Q92804 592 aaKnown RBP eCLIP2.93□□□□□ -1.94
SREK1-208ENST00000520580 ZNF597Q96LX8 424 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 OR8B4Q96RC9 309 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 LZTS2Q9BRK4 669 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 CHID1Q9BWS9 393 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 OCR1Q9BZK8 76 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 SLC17A4Q9Y2C5 497 aa2.93□□□□□ -1.94
SREK1-208ENST00000520580 BAZ1AQ9NRL2 1556 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms