RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CCL28Q9NRJ3 127 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 SMPD3Q9NY59 655 aaPredicted RBP2.1□□□□□ -2.07
SKP1-207ENST00000520417 ZNF226Q9NYT6 803 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 IL36GQ9NZH8 169 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 TBK1Q9UHD2 729 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 RPH3ALQ9UNE2 315 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 COPS3Q9UNS2 423 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 AK6Q9Y3D8 172 aaKnown RBP2.1□□□□□ -2.07
SKP1-207ENST00000520417 WIF1Q9Y5W5 379 aa2.1□□□□□ -2.07
SKP1-207ENST00000520417 TRAV40A0A0B4J280 105 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 A0A1B0GUS0 222 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 TBX19O60806 448 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 KRT8P05787 483 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 RNASE2P10153 161 aaKnown RBP2.09□□□□□ -2.07
SKP1-207ENST00000520417 CCDC130P13994 396 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 MUC1P15941 1255 aaPredicted RBP2.09□□□□□ -2.07
SKP1-207ENST00000520417 IMPDH1P20839 514 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 TDO2P48775 406 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 ARRB1P49407 418 aaPredicted RBP2.09□□□□□ -2.07
SKP1-207ENST00000520417 HSD17B7P56937 341 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 CBX1P83916 185 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 ZNF763Q0D2J5 394 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 UBE2SQ16763 222 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 C10orf120Q5SQS8 335 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 TTC23Q5W5X9 447 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 TPGS2Q68CL5 300 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 PYHIN1Q6K0P9 492 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 ZNF620Q6ZNG0 422 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 Q6ZR03 302 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 CCDC50Q8IVM0 306 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 SLC35F2Q8IXU6 374 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 OR10G3Q8NGC4 313 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 TRMT10AQ8TBZ6 339 aaKnown RBP2.09□□□□□ -2.07
SKP1-207ENST00000520417 FGF11Q92914 225 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 SMARCD2Q92925 531 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 ASB9Q96DX5 294 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 AMDHD1Q96NU7 426 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 TUBGCP2Q9BSJ2 902 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 RAB33BQ9H082 229 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 CGNQ9P2M7 1197 aaKnown RBP2.09□□□□□ -2.07
SKP1-207ENST00000520417 MARCOQ9UEW3 520 aaPredicted RBP2.09□□□□□ -2.07
SKP1-207ENST00000520417 OR12D3Q9UGF7 316 aa2.09□□□□□ -2.07
SKP1-207ENST00000520417 BRWD3Q6RI45 1802 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 IGKV1D-8A0A087WSZ0 117 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 IGHV1OR21-1A0A087WYE8 117 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 C7orf66A4D0T2 115 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 LRP5LA4QPB2 252 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 TRDCB7Z8K6 153 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 BTN3A3O00478 584 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 NDC80O14777 642 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 ANGPT2O15123 496 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 POLR2DO15514 142 aaKnown RBP2.08□□□□□ -2.08
SKP1-207ENST00000520417 CXCL13O43927 109 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 LGALS2P05162 132 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 HSMCR30P0CW71 290 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 PNMTP11086 282 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 ABOP16442 354 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 GCAP28676 217 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 GLP1RP43220 463 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 PKNOX1P55347 436 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 DLX1P56177 255 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 SMARCB1Q12824 385 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 RIPK1Q13546 671 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 SF3A2Q15428 464 aaKnown RBP2.08□□□□□ -2.08
SKP1-207ENST00000520417 STK11Q15831 433 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 RSPO1Q2MKA7 263 aaPredicted RBP2.08□□□□□ -2.08
SKP1-207ENST00000520417 SLC25A52Q3SY17 297 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 KRTAP13-2Q52LG2 175 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 BEND3Q5T5X7 828 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 TMEM225Q6GV28 225 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 SLC25A24Q6NUK1 477 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 CES3Q6UWW8 571 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 GET4Q7L5D6 327 aaPredicted RBP2.08□□□□□ -2.08
SKP1-207ENST00000520417 MCOLN3Q8TDD5 553 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 HTR3CQ8WXA8 447 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 EXOSC8Q96B26 276 aaKnown RBP2.08□□□□□ -2.08
SKP1-207ENST00000520417 SEC22AQ96IW7 307 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 POPDC2Q9HBU9 364 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 SIGLEC8Q9NYZ4 499 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 PCSK1NQ9UHG2 260 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 PCYOX1Q9UHG3 505 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 RASD1Q9Y272 281 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 MRPS33Q9Y291 106 aaKnown RBP2.08□□□□□ -2.08
SKP1-207ENST00000520417 SLC25A15Q9Y619 301 aa2.08□□□□□ -2.08
SKP1-207ENST00000520417 DHX57Q6P158 1386 aaKnown RBP2.08□□□□□ -2.08
SKP1-207ENST00000520417 METTL21EPA6NDL7 271 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 K7EQM0 130 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 RGS16O15492 202 aaPredicted RBP2.07□□□□□ -2.08
SKP1-207ENST00000520417 TAPBPO15533 448 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 CD5LO43866 347 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 GMFGO60234 142 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 UGT1A9O60656 530 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 PFKFB2O60825 505 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 RCBTB2O95199 551 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 TDGF1P13385 188 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 CELP19835 753 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 HMGB2P26583 209 aaKnown RBP2.07□□□□□ -2.08
SKP1-207ENST00000520417 CALCRP30988 508 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 P2RY1P47900 373 aa2.07□□□□□ -2.08
SKP1-207ENST00000520417 PPT1P50897 306 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms