RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 APOBEC3AP31941 199 aaPredicted RBP14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 GLIPR1L2Q4G1C9 344 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 FAM69AQ5T7M9 428 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 DHDDSQ86SQ9 333 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 EPHX4Q8IUS5 362 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 UEVLDQ8IX04 471 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 ZNF525Q8N782 197 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 DNAJA4Q8WW22 397 aaPredicted RBP14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 SLC47A1Q96FL8 570 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 SLC38A2Q96QD8 506 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 EPYCQ99645 322 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 ASPNQ9BXN1 380 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 PIF1Q9H611 641 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 NPHS2Q9NP85 383 aa14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 TESQ9UGI8 421 aaKnown RBP14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 LEF1Q9UJU2 399 aaPredicted RBP14.11□□□□□ -0.15
IGHV3-42-201ENST00000520410 TRAV36DV7A0A075B6V5 113 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 IGHV1-18A0A0C4DH31 117 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 HMGB1P1B2RPK0 211 aaPredicted RBP14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 TPST1O60507 370 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 SEC14L2O76054 403 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 OPN1SWP03999 348 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 ATP4BP51164 291 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 P2RY4P51582 365 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 SNRPD2P62316 118 aaKnown RBP14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 EGR4Q05215 589 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 NPRL3Q12980 569 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 NFYCQ13952 458 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 C11orf71Q6IPW1 123 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 ULK3Q6PHR2 472 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 DHRS4L2Q6PKH6 230 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 C5orf46Q6UWT4 87 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 HDXQ7Z353 690 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 SLC46A3Q7Z3Q1 461 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 C10orf111Q8N326 155 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 SMYD1Q8NB12 490 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 HIPK4Q8NE63 616 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 SLC26A7Q8TE54 656 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 FAM168AQ92567 244 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 TAAR8Q969N4 342 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 SLC35B4Q969S0 331 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 OXGR1Q96P68 337 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 VRK1Q99986 396 aaPredicted RBP14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 PTDSS2Q9BVG9 487 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 GRIP2Q9C0E4 1043 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 OBP2BQ9NPH6 170 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 TRIM33Q9UPN9 1127 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 NDUFAF1Q9Y375 327 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 FKBP7Q9Y680 259 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 USF3Q68DE3 2245 aa14.1□□□□□ -0.15
IGHV3-42-201ENST00000520410 PRR14LQ5THK1 2151 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 ZFHX3Q15911 3703 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 A0A0G2JND7 137 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 KIAA1324LA8MWY0 1029 aaPredicted RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 FTCDNL1E5RQL4 147 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 M0R3G1 203 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 NPIPB7O75200 414 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 HOXB9P17482 250 aaPredicted RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 AHCYP23526 432 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 MRPL19P49406 292 aaKnown RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 MTPNP58546 118 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 DSCR9P59020 149 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 ARF1P84077 181 aaKnown RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 POU3F1Q03052 451 aaPredicted RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 PMS2P3Q13401 168 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 OR1Q1Q15612 314 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 ANKRD16Q6P6B7 361 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 LINGO2Q7L985 606 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 PRIMA1Q86XR5 153 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 PIK3C3Q8NEB9 887 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 BHLHE22Q8NFJ8 381 aaPredicted RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 VANGL1Q8TAA9 524 aaPredicted RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 CPPED1Q9BRF8 314 aaPredicted RBP14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 IKZF5Q9H5V7 419 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 C12orf10Q9HB07 376 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 RCE1Q9Y256 329 aa14.09□□□□□ -0.15
IGHV3-42-201ENST00000520410 M0R3H8 397 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 LY6HO94772 140 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 IDH3GP51553 393 aaPredicted RBP14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 SH3BGRP55822 239 aaPredicted RBP14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 CEACAM16Q2WEN9 425 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 H1FNTQ75WM6 255 aaPredicted RBP14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 COMTD1Q86VU5 262 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 LSMEM1Q8N8F7 131 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 C11orf65Q8NCR3 313 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 MAGEB18Q96M61 343 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 MCHR1Q99705 422 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 EMC6Q9BV81 110 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 LINC00470Q9BZP3 86 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 TMEM38AQ9H6F2 299 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 CRLF2Q9HC73 371 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 B3GAT2Q9NPZ5 323 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 KLHL14Q9P2G3 628 aa14.08□□□□□ -0.16
IGHV3-42-201ENST00000520410 VPS13CQ709C8 3753 aa14.07□□□□□ -0.16
IGHV3-42-201ENST00000520410 ROS1P08922 2347 aa14.07□□□□□ -0.16
IGHV3-42-201ENST00000520410 CPSF4LA6NMK7 179 aaKnown RBP14.07□□□□□ -0.16
IGHV3-42-201ENST00000520410 ZNF726A6NNF4 738 aa14.07□□□□□ -0.16
IGHV3-42-201ENST00000520410 C11orf98E9PRG8 122 aa14.07□□□□□ -0.16
IGHV3-42-201ENST00000520410 H7C417 338 aa14.07□□□□□ -0.16
IGHV3-42-201ENST00000520410 CD5LO43866 347 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms