RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SIKE1Q9BRV8 207 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 CENPOQ9BU64 300 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 SPATA5L1Q9BVQ7 753 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 TMEM120AQ9BXJ8 343 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 ESRP2Q9H6T0 727 aaKnown RBP8.22□□□□□ -1.09
HDAC3-215ENST00000519474 KAT8Q9H7Z6 458 aaKnown RBP8.22□□□□□ -1.09
HDAC3-215ENST00000519474 C12orf10Q9HB07 376 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 NPAP1Q9NZP6 1156 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 TRIM33Q9UPN9 1127 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 SLC25A15Q9Y619 301 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 IGKV1D-42A0A075B6H8 117 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 A0A087WUJ7 227 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 A0A1B0GWA3 101 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 A0A1W2PR80 420 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 CIB4A0PJX0 185 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 SHISA9B4DS77 424 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 MS4A18H0YCH9 400 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 OVOL3O00110 214 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 ARHGEF9O43307 516 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 TMCC2O75069 709 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 FZD7O75084 574 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 TSC22D2O75157 780 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 SERPINB7O75635 380 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 RAD51DO75771 328 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 VAMP5O95183 116 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 LGI1O95970 557 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 CD8AP01732 235 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 CD3EP07766 207 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 DANCRP0C864 163 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 PAX1P15863 534 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 AQP1P29972 269 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 RPS5P46782 204 aaKnown RBP8.21□□□□□ -1.1
HDAC3-215ENST00000519474 BSPH1Q075Z2 132 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 RBBP4Q09028 425 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 OR1Q1Q15612 314 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 STK11Q15831 433 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 MS4A18Q3C1V0 323 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 C9orf135Q5VTT2 229 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 NANOGP8Q6NSW7 305 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 C6orf89Q6UWU4 347 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 NHLRC1Q6VVB1 395 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 LINC00114Q6XXX2 140 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 AAED1Q7RTV5 226 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 NET1Q7Z628 596 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-215ENST00000519474 DHDDSQ86SQ9 333 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 KRT73Q86Y46 540 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 P3H2Q8IVL5 708 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 CIARTQ8N365 385 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-215ENST00000519474 GPR32P1Q8NGA4 272 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 OR52N5Q8NH56 324 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 OR10A6Q8NH74 314 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 BOD1Q96IK1 185 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF607Q96SK3 696 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 CCL19Q99731 98 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 TAPBPLQ9BX59 468 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 C1QTNF6Q9BXI9 259 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 GSX2Q9BZM3 304 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 TRIM2Q9C040 744 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 AMBRA1Q9C0C7 1298 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 NANOGQ9H9S0 305 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 CACYBPQ9HB71 228 aaKnown RBP8.21□□□□□ -1.1
HDAC3-215ENST00000519474 SAR1AQ9NR31 198 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 PAPOLBQ9NRJ5 636 aaKnown RBP8.21□□□□□ -1.1
HDAC3-215ENST00000519474 ZNF701Q9NV72 531 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-215ENST00000519474 ADPRHL2Q9NX46 363 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 TAS2R16Q9NYV7 291 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 UPB1Q9UBR1 384 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 MALT1Q9UDY8 824 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 CORO2BQ9UQ03 480 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 RASD1Q9Y272 281 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 SLC9A8Q9Y2E8 581 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 RNF115Q9Y4L5 304 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 ROS1P08922 2347 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 HIVEP1P15822 2718 aa8.21□□□□□ -1.1
HDAC3-215ENST00000519474 ANKRD17O75179 2603 aaKnown RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 TACC2O95359 2948 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 LOC100653049A0A140TA62 436 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 LOC102725191A0A1B0GVB3 256 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 PRORSD1PA6NEY8 169 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 TRIM64A6NGJ6 449 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 TRIM64BA6NI03 449 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ELOA3DA6NLF2 546 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ANGPT2O15123 496 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 CLOCKO15516 846 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 IDH3BO43837 385 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 OR2T1O43869 369 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 KRT34O76011 436 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 C8BP07358 591 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SOD3P08294 240 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 PNMTP11086 282 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 HOXB1P14653 301 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-215ENST00000519474 CBLP22681 906 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 MPGP29372 298 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 PTH2RP49190 550 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 SELENOPP49908 381 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 ARFIP2P53365 341 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 MTPNP58546 118 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 GUCY1A3Q02108 690 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 LGALS3BPQ08380 585 aa8.2□□□□□ -1.1
HDAC3-215ENST00000519474 BNIP1Q12981 228 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms