RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 DNAJC12Q9UKB3 198 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 IKZF3Q9UKT9 509 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 SLC7A7Q9UM01 511 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 MEMO1Q9Y316 297 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 NME7Q9Y5B8 376 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 WIF1Q9Y5W5 379 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 AUP1Q9Y679 476 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 CSNK1G3Q9Y6M4 447 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 CDH10Q9Y6N8 788 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 USP47Q96K76 1375 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 PLEKHG1Q9ULL1 1385 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 PLEKHH1Q9ULM0 1364 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 FGD5Q6ZNL6 1462 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 NEURL4Q96JN8 1562 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 RANBP2P49792 3224 aaKnown RBP1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 KIAA0556O60303 1618 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 C9orf84Q5VXU9 1444 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 RIMS2Q9UQ26 1411 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 AFF2P51816 1311 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 PCDH11XQ9BZA7 1347 aa1.66□□□□□ -2.14
TVP23C-CDRT4-202ENST00000518506 CAMTA1Q9Y6Y1 1673 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 ADAMTS12P58397 1594 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CPDO75976 1380 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 NID2Q14112 1375 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 KIAA0232Q92628 1395 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 A0A0A6YYC8 382 aaPredicted RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PPIAL4CA0A0B4J2A2 164 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 KBTBD11-OT1A0A1B0GTJ5 212 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 LOC101059948A0A1B0GTJ6 334 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 A0A1B0GVL5 298 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 A0A1W2PNV4 684 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 ZNF233A6NK53 670 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PP2D1A8MPX8 630 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 RNF212BA8MTL3 300 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 EVPLLA8MZ36 301 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 TMEM150CB9EJG8 249 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 F8W036 122 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 G3V3Y1 287 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 H3BN98 237 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 I3L1I5 382 aaPredicted RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 M0QZ92 97 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 M0R3G1 203 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PDXKO00764 312 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 TXNDC9O14530 226 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 RFXANKO14593 260 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 ARPC1BO15143 372 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 TOX3O15405 576 aaPredicted RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 MSH4O15457 936 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CLOCKO15516 846 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 LINC01565O15544 149 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 XRCC2O43543 280 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 NDUFA2O43678 99 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 KDELR3O43731 214 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 SCO2O43819 266 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 UGT1A9O60656 530 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 FCGR3BO75015 233 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 BANF1O75531 89 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PRKRAO75569 313 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 ZMPSTE24O75844 475 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 OR2B3O76000 313 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 OR2F2O95006 317 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 FARS2O95363 451 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 SYNGR4O95473 234 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CLDN9O95484 217 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 NADKO95544 446 aaPredicted RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CXCL14O95715 111 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 IFNA5P01569 189 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 APOHP02749 345 aaPredicted RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CRYGBP07316 175 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PRSS1P07477 247 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 DCNP07585 359 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CD3GP09693 182 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 ZDHHC11BP0C7U3 371 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 FAM157CP0CG43 387 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 SMIM6P0DI80 62 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PPIAL4GP0DN37 164 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CEACAM1P13688 526 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 GTF2F2P13984 249 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CBR1P16152 277 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 HOXB6P17509 224 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CELP19835 753 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 ATP6V1B2P21281 511 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PRKACGP22612 351 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 LHCGRP22888 699 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 STOMP27105 288 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PSMB4P28070 264 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CRABP1P29762 137 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 CHRNB4P30926 498 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 GNRHRP30968 328 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 LCN1P31025 176 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 TIA1P31483 386 aaKnown RBP eCLIP1.65□□□□□ -2.156e-7■■■□□ 16.4
TVP23C-CDRT4-202ENST00000518506 AKT2P31751 481 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 DUTP33316 252 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PTGER4P35408 488 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 PTGFRP43088 359 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 RPS5P46782 204 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 QARSP47897 775 aaKnown RBP1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 SLC6A8P48029 635 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 NPBWR2P48146 333 aa1.65□□□□□ -2.15
TVP23C-CDRT4-202ENST00000518506 ARRB1P49407 418 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms