RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TTC9Q92623 222 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 MR1Q95460 341 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 TSPAN32Q96QS1 320 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 CMAHPQ9Y471 501 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 LOC110117498-PIK3R3F6TDL0 507 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 TBX1O43435 398 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 CBFA2T3O75081 653 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 HTR3AP46098 478 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 ACTA2P62736 377 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 ACTG2P63267 376 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 PMEPA1Q969W9 287 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 SLC25A36Q96CQ1 311 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 GALNT9Q9HCQ5 603 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 TAS2R5Q9NYW4 299 aa24.06■■□□□ 1.44
COL13A1-210ENST00000517713 SMIM30A4D0T7 59 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 SELENOFO60613 162 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 ZNF883P0CG24 379 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 E2F1Q01094 437 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 FAM69AQ5T7M9 428 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 C1orf140Q5VVS0 124 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 LYSMD2Q8IV50 215 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 OR5J2Q8NH18 312 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 ALG12Q9BV10 488 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 TTTY10Q9BZA0 68 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 ULBP3Q9BZM4 244 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 KCNN2Q9H2S1 579 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 PCNX3Q9H6A9 2034 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 PYCR1P32322 319 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 TMED10P49755 219 aaKnown RBP24.05■■□□□ 1.44
COL13A1-210ENST00000517713 KRR1Q13601 381 aaKnown RBP24.05■■□□□ 1.44
COL13A1-210ENST00000517713 TP53I3Q53FA7 332 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 LINC01590Q5TEZ4 76 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 GPR139Q6DWJ6 353 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 DBX2Q6ZNG2 339 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 LAX1Q8IWV1 398 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 EXD3Q8N9H8 876 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 MINDY2Q8NBR6 621 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 STK35Q8TDR2 534 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 RNF138Q8WVD3 245 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 ASB15Q8WXK1 588 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 WDFY2Q96P53 400 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 MOKQ9UQ07 419 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 UGT2A1Q9Y4X1 527 aa24.05■■□□□ 1.44
COL13A1-210ENST00000517713 ISPDA4D126 451 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 OR2J2O76002 312 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 PSMD7P51665 324 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 SUMO3P55854 103 aaPredicted RBP24.04■■□□□ 1.44
COL13A1-210ENST00000517713 SLC3A1Q07837 685 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 TRAM1Q15629 374 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 MESTQ5EB52 335 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 FAM198BQ6UWH4 519 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 SYS1Q8N2H4 156 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 FAM83FQ8NEG4 500 aaPredicted RBP24.04■■□□□ 1.44
COL13A1-210ENST00000517713 RHBDD1Q8TEB9 315 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 ST8SIA1Q92185 356 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 AP3S1Q92572 193 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 DEFB126Q9BYW3 111 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 SLC39A1Q9NY26 324 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 ZNF346Q9UL40 294 aaKnown RBP24.04■■□□□ 1.44
COL13A1-210ENST00000517713 ZDBF2Q9HCK1 2354 aa24.04■■□□□ 1.44
COL13A1-210ENST00000517713 LOC102723996A0A087X1L8 192 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 FAM171A2A8MVW0 826 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 F8A1P23610 371 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 GTF2E2P29084 291 aaKnown RBP24.03■■□□□ 1.44
COL13A1-210ENST00000517713 CAV3P56539 151 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 PCOLCEQ15113 449 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 SGCBQ16585 318 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 CDONQ4KMG0 1287 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 LYPD8Q6UX82 237 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 RPTNQ6XPR3 784 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 SLC22A8Q8TCC7 542 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 SNX33Q8WV41 574 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 TSSK2Q96PF2 358 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 MED11Q9P086 117 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 C9J4A7 227 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 PRKCAP17252 672 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 LYPD4Q6UWN0 246 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 C5orf46Q6UWT4 87 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 PLEKHG7Q6ZR37 379 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 KLRF1Q9NZS2 232 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 COPS3Q9UNS2 423 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 PTRH2Q9Y3E5 179 aaKnown RBP24.03■■□□□ 1.44
COL13A1-210ENST00000517713 PCDHGB2Q9Y5G2 931 aa24.03■■□□□ 1.44
COL13A1-210ENST00000517713 SHISA3A0PJX4 238 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 SLC35F4A4IF30 521 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 B4DXG7 233 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 C11orf98E9PRG8 122 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 MAGEB4O15481 346 aaPredicted RBP24.02■■□□□ 1.44
COL13A1-210ENST00000517713 TGM1P22735 817 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 BTBD16Q32M84 506 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 STEAP3Q658P3 488 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 BICRALQ6AI39 1079 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 DMKNQ6E0U4 476 aaPredicted RBP24.02■■□□□ 1.44
COL13A1-210ENST00000517713 ELP5Q8TE02 316 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 MRPL48Q96GC5 212 aaKnown RBP24.02■■□□□ 1.44
COL13A1-210ENST00000517713 OR11A1Q9GZK7 315 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 ABCB9Q9NP78 766 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 WDR70Q9NW82 654 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 NCDNQ9UBB6 729 aa24.02■■□□□ 1.44
COL13A1-210ENST00000517713 GRIP1Q9Y3R0 1128 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms