RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CMIPQ8IY22 773 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 CCDC36Q8IYA8 594 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 CLEC4FQ8N1N0 589 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 KRTCAP2Q8N6L1 136 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 SYT14Q8NB59 555 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 MZB1Q8WU39 189 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 ROPN1LQ96C74 230 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 C1orf147Q96MC9 270 aaPredicted RBP9.36□□□□□ -0.91
DDX41-216ENST00000513562 FMO2Q99518 471 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 PRPF18Q99633 342 aaKnown RBP9.36□□□□□ -0.91
DDX41-216ENST00000513562 DUSP26Q9BV47 211 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 ADPRHL2Q9NX46 363 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 MYEF2Q9P2K5 600 aaKnown RBP9.36□□□□□ -0.91
DDX41-216ENST00000513562 GIMAP2Q9UG22 337 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 ZDHHC2Q9UIJ5 367 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 RCE1Q9Y256 329 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 RASD1Q9Y272 281 aa9.36□□□□□ -0.91
DDX41-216ENST00000513562 FRS3O43559 492 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 SCN2BO60939 215 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 GLRA3O75311 464 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 IGHV2-5P01817 119 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
DDX41-216ENST00000513562 ABHD2P08910 425 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 OR12D1P0DN82 309 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 NAT2P11245 290 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 PRPS1L1P21108 318 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 ECHS1P30084 290 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 GCH1P30793 250 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 RPS23P62266 143 aaKnown RBP9.35□□□□□ -0.91
DDX41-216ENST00000513562 MVKQ03426 396 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 FXNQ16595 210 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 UGT3A2Q3SY77 523 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 AVPI1Q5T686 147 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 PRAMEF8Q5VWM4 474 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 PRAMEF7Q5VXH5 474 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 DDIASQ8IXT1 998 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 CLECL1Q8IZS7 167 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 TWIST2Q8WVJ9 160 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 XAGE5Q8WWM1 108 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 RAB8BQ92930 207 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 MS4A3Q96HJ5 214 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 PPP3R2Q96LZ3 170 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 DUX5Q96PT3 197 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 TAPBPLQ9BX59 468 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 C7orf69Q9H7B7 122 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 GPR35Q9HC97 309 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 B3GNT2Q9NY97 397 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
DDX41-216ENST00000513562 HEATR1Q9H583 2144 aaKnown RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 PRAMEF27A3QJZ7 478 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 CFAP73A6NFT4 308 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 ZNF99A8MXY4 864 aaPredicted RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 TMEM233B4DJY2 109 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 PLIN3O60664 434 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 SLC43A1O75387 559 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 CHRM4P08173 479 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 UQCRBP14927 111 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 ZNF14P17017 642 aaPredicted RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 CXCR1P25024 350 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 MAGEB1P43366 347 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 CAPZA2P47755 286 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 EPS8Q12929 822 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 GSTA3Q16772 222 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 CEACAM16Q2WEN9 425 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 TRMT5Q32P41 509 aaKnown RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 CCDC153Q494R4 210 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 MMEL1Q495T6 779 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 XKR7Q5GH72 579 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 TNFAIP8L2Q6P589 184 aaPredicted RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 HOMEZQ8IX15 550 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 GSPT2Q8IYD1 628 aaKnown RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 ZNF75AQ96N20 296 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 PKP2Q99959 881 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 C1orf50Q9BV19 199 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 ZNF346Q9UL40 294 aaKnown RBP9.34□□□□□ -0.91
DDX41-216ENST00000513562 FZR1Q9UM11 496 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 NOX1Q9Y5S8 564 aa9.34□□□□□ -0.91
DDX41-216ENST00000513562 DSPPQ9NZW4 1301 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 A0A1W2PPW3 197 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 AGAP5A6NIR3 686 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 A8MVM7 634 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 CLDN34H7C241 214 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 CDC14BO60729 498 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 PEX11AO75192 247 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 NPIPB7O75200 414 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 SEC14L2O76054 403 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 HLA-HP01893 362 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 FGF4P08620 206 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 CPA3P15088 417 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 CLDN17P56750 224 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 HPCAP84074 193 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 BNIP2Q12982 314 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 BAMBIQ13145 260 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 GSG1Q2KHT4 349 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 GKAP1Q5VSY0 366 aaPredicted RBP9.33□□□□□ -0.92
DDX41-216ENST00000513562 C1orf140Q5VVS0 124 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 CNPY4Q8N129 248 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 GPR137CQ8N3F9 429 aa9.33□□□□□ -0.92
DDX41-216ENST00000513562 KIF18AQ8NI77 898 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms