RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TUBA1CQ9BQE3 449 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 NAA11Q9BSU3 229 aaPredicted RBP11.21□□□□□ -0.61
PDPN-210ENST00000513143 OR52D1Q9H346 318 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 FANCFQ9NPI8 374 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 TAS2R5Q9NYW4 299 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ENOPH1Q9UHY7 261 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ORC6Q9Y5N6 252 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 CDH10Q9Y6N8 788 aa11.21□□□□□ -0.61
PDPN-210ENST00000513143 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.62
PDPN-210ENST00000513143 LOC102725191A0A1B0GVB3 256 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 A0A1W2PNV4 684 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 H0YJX3 145 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 BLOC1S5-TXNDC5H3BN57 136 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
PDPN-210ENST00000513143 NDUFB2O95178 105 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 SNAP29O95721 258 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 IGFBP1P08833 259 aaPredicted RBP11.2□□□□□ -0.62
PDPN-210ENST00000513143 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 CDH2P19022 906 aaPredicted RBP11.2□□□□□ -0.62
PDPN-210ENST00000513143 KLK2P20151 261 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 AQP2P41181 271 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 CRISP1P54107 249 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 RPL18Q07020 188 aaKnown RBP11.2□□□□□ -0.62
PDPN-210ENST00000513143 TAF11Q15544 211 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 SLC36A3Q495N2 470 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 EMC4Q5J8M3 183 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 MED12LQ86YW9 2145 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 SLC43A2Q8N370 569 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 LRRC75AQ8NAA5 344 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 OR5M9Q8NGP3 310 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 MOSPD2Q8NHP6 518 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 FAM57AQ8TBR7 257 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 FANK1Q8TC84 345 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 UCN2Q96RP3 112 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 GABARAPL3Q9BY60 117 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 PLA2G12AQ9BZM1 189 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 ENKD1Q9H0I2 346 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 EGLN3Q9H6Z9 239 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 PNPLA3Q9NST1 481 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 SMPD3Q9NY59 655 aaPredicted RBP11.2□□□□□ -0.62
PDPN-210ENST00000513143 MCTS1Q9ULC4 181 aaKnown RBP11.2□□□□□ -0.62
PDPN-210ENST00000513143 RASD1Q9Y272 281 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 ZNF835Q9Y2P0 537 aa11.2□□□□□ -0.62
PDPN-210ENST00000513143 KMT2BQ9UMN6 2715 aaPredicted RBP11.2□□□□□ -0.62
PDPN-210ENST00000513143 ALPK2Q86TB3 2170 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 IGHV3-15A0A0B4J1V0 119 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 CLCA1A8K7I4 914 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 E9PQ18 207 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 RAMP1O60894 148 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 VAMP5O95183 116 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 OR6A2O95222 327 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 SOX14O95416 240 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 SYNGR4O95473 234 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 ABOP16442 354 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 POLR2IP36954 125 aaKnown RBP11.19□□□□□ -0.62
PDPN-210ENST00000513143 PUDPQ08623 228 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 NPRL3Q12980 569 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 PON3Q15166 354 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 POU4F3Q15319 338 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 SF3B4Q15427 424 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDPN-210ENST00000513143 ZIK1Q3SY52 487 aaPredicted RBP11.19□□□□□ -0.62
PDPN-210ENST00000513143 ALG10Q5BKT4 473 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 TMEM225Q6GV28 225 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 Q6ZPB1 254 aaPredicted RBP11.19□□□□□ -0.62
PDPN-210ENST00000513143 CCDC103Q8IW40 242 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 ST6GALNAC3Q8NDV1 305 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 OR8D4Q8NGM9 314 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 ROBO4Q8WZ75 1007 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 SAMD8Q96LT4 415 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 OXGR1Q96P68 337 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 BBC3Q96PG8 261 aaPredicted RBP11.19□□□□□ -0.62
PDPN-210ENST00000513143 GPX7Q96SL4 187 aaPredicted RBP11.19□□□□□ -0.62
PDPN-210ENST00000513143 MBOAT4Q96T53 435 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 TOR3AQ9H497 397 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 B3GAT1Q9P2W7 334 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 ZNF175Q9Y473 711 aa11.19□□□□□ -0.62
PDPN-210ENST00000513143 DOCK7Q96N67 2140 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 MCIDASD6RGH6 385 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 C11orf98E9PRG8 122 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 H3BN98 237 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 RNF13O43567 381 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 CYTIPO60759 359 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 WDR1O75083 606 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 TPOP07202 933 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 HOXD4P09016 255 aaPredicted RBP11.18□□□□□ -0.62
PDPN-210ENST00000513143 GABRA1P14867 456 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 AHCYP23526 432 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 POU1F1P28069 291 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 EPHA2P29317 976 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 SLC6A6P31641 620 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 PTGER4P35408 488 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 AQP4P55087 323 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 CDK5Q00535 292 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 RBPJQ06330 500 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 SLC17A1Q14916 467 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 ACSF3Q4G176 576 aaPredicted RBP11.18□□□□□ -0.62
PDPN-210ENST00000513143 ABLIM2Q6H8Q1 611 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 ZNF585AQ6P3V2 769 aa11.18□□□□□ -0.62
PDPN-210ENST00000513143 IZUMO2Q6UXV1 221 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms