RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR2T1O43869 369 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 HNRNPCL1O60812 293 aaKnown RBP10.94□□□□□ -0.66
VEGFA-216ENST00000512683 NPIPB7O75200 414 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 AKR7A3O95154 331 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 TGDSO95455 350 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 ANP32DO95626 131 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 IGKV3-15P01624 115 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 IGLV1-44P01699 117 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 BCHEP06276 602 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 HNRNPCL4P0DMR1 293 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 CBR1P16152 277 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 GIFP27352 417 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 CRATP43155 626 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 IDH3AP50213 366 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 IDH3GP51553 393 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-216ENST00000512683 CRISP3P54108 245 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 DSTNP60981 165 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 POU3F1Q03052 451 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-216ENST00000512683 KRTAP24-1Q3LI83 254 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 IQCCQ4KMZ1 466 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 TTMPQ5BVD1 217 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 RPS26P11Q5JNZ5 115 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-216ENST00000512683 FAM120AOSQ5T036 256 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 RNF220Q5VTB9 566 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 SLC2A7Q6PXP3 512 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 C5orf46Q6UWT4 87 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF836Q6ZNA1 936 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 SLC46A3Q7Z3Q1 461 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 GPAT4Q86UL3 456 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 CLIP4Q8N3C7 705 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 OR52P1PQ8NH57 321 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 ATP6V1G3Q96LB4 118 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 ANKRD27Q96NW4 1050 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF385AQ96PM9 386 aaKnown RBP10.94□□□□□ -0.66
VEGFA-216ENST00000512683 EBF4Q9BQW3 602 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 PRR14Q9BWN1 585 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 RSPO3Q9BXY4 272 aaPredicted RBP10.94□□□□□ -0.66
VEGFA-216ENST00000512683 RMND5AQ9H871 391 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 C12orf10Q9HB07 376 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 SLC52A3Q9NQ40 469 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 P2RX2Q9UBL9 471 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 RCE1Q9Y256 329 aa10.94□□□□□ -0.66
VEGFA-216ENST00000512683 TMEM247A6NEH6 219 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 TGFAP01135 160 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 TACSTD2P09758 323 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 NUDT7P0C024 238 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 OR4A8P0C604 315 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 GKN3PP0CG01 181 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 BMP2P12643 396 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 PRG2P13727 222 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 PCMT1P22061 227 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 IGFBP5P24593 272 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 ARR3P36575 388 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 EVX1P49640 407 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 P2RY4P51582 365 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 NAAAQ02083 359 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 GGTLC2Q14390 218 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 RGNQ15493 299 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 ADIPOQQ15848 244 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 HIKESHIQ53FT3 197 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 C6orf10Q5SRN2 563 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 C1orf140Q5VVS0 124 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 PRAMEF8Q5VWM4 474 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 PRAMEF7Q5VXH5 474 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 NET1Q7Z628 596 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-216ENST00000512683 RFLNBQ8N5W9 214 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 HTRA1Q92743 480 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 TMEM19Q96HH6 336 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 SORCS2Q96PQ0 1159 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 VRK1Q99986 396 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-216ENST00000512683 SPATA9Q9BWV2 254 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 TCF7L2Q9NQB0 619 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 SLC25A37Q9NYZ2 338 aa10.93□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-216ENST00000512683 IGHV4-61A0A0C4DH41 118 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 CLIC1O00299 241 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 FZD7O75084 574 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 STAMBPO95630 424 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 LGI1O95970 557 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF16P17020 682 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF43P17038 809 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 CDH2P19022 906 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-216ENST00000512683 CHN2P52757 468 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 MFSD13AQ14CX5 517 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 LRIF1Q5T3J3 769 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 EPHX4Q8IUS5 362 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 MSRB3Q8IXL7 192 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 C10orf111Q8N326 155 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 ZNF786Q8N393 782 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 LRRC8CQ8TDW0 803 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 MAL2Q969L2 176 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 DOK1Q99704 481 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 CCDC28BQ9BUN5 200 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 C19orf24Q9BVV8 132 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 DENND2DQ9H6A0 471 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-216ENST00000512683 BCL2L10Q9HD36 194 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 ADPRHL2Q9NX46 363 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 SLAMF8Q9P0V8 285 aa10.92□□□□□ -0.66
VEGFA-216ENST00000512683 TMEM229AB2RXF0 380 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms