RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 OR11A1Q9GZK7 315 aa6.3□□□□□ -1.4
USP46-208ENST00000512656 PIF1Q9H611 641 aa6.3□□□□□ -1.4
USP46-208ENST00000512656 MTHFD2LQ9H903 347 aaPredicted RBP6.3□□□□□ -1.4
USP46-208ENST00000512656 CACYBPQ9HB71 228 aaKnown RBP6.3□□□□□ -1.4
USP46-208ENST00000512656 BTNL2Q9UIR0 455 aa6.3□□□□□ -1.4
USP46-208ENST00000512656 CDC42EP3Q9UKI2 254 aa6.3□□□□□ -1.4
USP46-208ENST00000512656 TMED7Q9Y3B3 224 aa6.3□□□□□ -1.4
USP46-208ENST00000512656 IGHV4-30-2A0A087WSY4 118 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 CCDC154A6NI56 674 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 OR6C65A6NJZ3 312 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 NUDT19A8MXV4 375 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 HMGN4O00479 90 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 ITM2AO43736 263 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 KRT33AO76009 404 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 KRT75O95678 551 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 DBIP07108 87 aaKnown RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 ITGA5P08648 1049 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 CCNA2P20248 432 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 PTNP21246 168 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 CXCR1P25024 350 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 TACR3P29371 465 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 MPGP29372 298 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 EFNA4P52798 201 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 PRPS1P60891 318 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 COPZ1P61923 177 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 PHC1P78364 1004 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 IRX1P78414 480 aaPredicted RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 LOXL1Q08397 574 aaPredicted RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 FUT5Q11128 374 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 STX3Q13277 289 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 SLC17A1Q14916 467 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 KIR3DS1Q14943 382 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 TMEM249Q2WGJ8 235 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 C11orf71Q6IPW1 123 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.29□□□□□ -1.45e-6■■■■□ 22.8
USP46-208ENST00000512656 ZNF621Q6ZSS3 439 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 SPATA19Q7Z5L4 167 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 CROCCP2Q86T23 111 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 RNF130Q86XS8 419 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 PEX5LQ8IYB4 626 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 LINC01356Q8N9X3 169 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 POMGNT2Q8NAT1 580 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 GLB1L3Q8NCI6 653 aaPredicted RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 AENQ8WTP8 325 aaKnown RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 CNOT9Q92600 299 aaKnown RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 PROX1Q92786 737 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 TMEM45BQ96B21 275 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 ZG16BQ96DA0 208 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 PANX1Q96RD7 426 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 TNFRSF13CQ96RJ3 184 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 KCNS3Q9BQ31 491 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 SF3B5Q9BWJ5 86 aaKnown RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 TAPBPLQ9BX59 468 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 BEX2Q9BXY8 128 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 NUF2Q9BZD4 464 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 AMBRA1Q9C0C7 1298 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 SLC38A1Q9H2H9 487 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 ARMC7Q9H6L4 198 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 MEAF6Q9HAF1 191 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 MOV10Q9HCE1 1003 aaKnown RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 OBP2BQ9NPH6 170 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 SLC17A5Q9NRA2 495 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 CALML5Q9NZT1 146 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 LPAR3Q9UBY5 353 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 HAO1Q9UJM8 370 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 OSGIN1Q9UJX0 560 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
USP46-208ENST00000512656 FLVCR1Q9Y5Y0 555 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 FKBP7Q9Y680 259 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 ATP23Q9Y6H3 246 aa6.29□□□□□ -1.4
USP46-208ENST00000512656 A0A1W2PR80 420 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 TMEM72A0PK05 275 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 TMEM247A6NEH6 219 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 CLDN24A6NM45 220 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 TRPC5OSA6NMA1 111 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 PDLIM1O00151 329 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 AP3D1O14617 1153 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 BCAS1O75363 584 aaPredicted RBP6.28□□□□□ -1.4
USP46-208ENST00000512656 VAMP5O95183 116 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 FAM157CP0CG43 387 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 CD247P20963 164 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 VLDLRP98155 873 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 MVKQ03426 396 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 EPS8Q12929 822 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 LARS2Q15031 903 aaKnown RBP6.28□□□□□ -1.4
USP46-208ENST00000512656 SYPL1Q16563 259 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 LIN52Q52LA3 116 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 OTUD3Q5T2D3 398 aaPredicted RBP6.28□□□□□ -1.4
USP46-208ENST00000512656 C6orf52Q5T4I8 152 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 MRPL2Q5T653 305 aaKnown RBP6.28□□□□□ -1.4
USP46-208ENST00000512656 C9orf135Q5VTT2 229 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 CYB5R2Q6BCY4 276 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 TMEM225Q6GV28 225 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 WBP2NLQ6ICG8 309 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 WDR93Q6P2C0 686 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 AAED1Q7RTV5 226 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 MREGQ8N565 214 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 ANKFN1Q8N957 763 aa6.28□□□□□ -1.4
USP46-208ENST00000512656 WDR31Q8NA23 367 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms