RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 NATD1Q8N6N6 113 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 SIGLECL1Q8N7X8 197 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 FAM71CQ8NEG0 241 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 OR5P2Q8WZ92 322 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 YIPF5Q969M3 257 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 SLC25A28Q96A46 364 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 MOAP1Q96BY2 351 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 FCRL1Q96LA6 429 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 TSSK3Q96PN8 268 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 OR7D2Q96RA2 312 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 MRPL37Q9BZE1 423 aaKnown RBP9.92□□□□□ -0.82
RNF4-216ENST00000511859 ZNF385DQ9H6B1 395 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 NOX3Q9HBY0 568 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 BAIAP2L1Q9UHR4 511 aa9.92□□□□□ -0.82
RNF4-216ENST00000511859 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
RNF4-216ENST00000511859 TMEM233B4DJY2 109 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 NPHS1O60500 1241 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 FCMRO60667 390 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 VAMP5O95183 116 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 SERPINE1P05121 402 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 GPIP06744 558 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 RNASE1P07998 156 aaKnown RBP9.91□□□□□ -0.82
RNF4-216ENST00000511859 CELA3BP08861 270 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 UROSP10746 265 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 CCNA2P20248 432 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 RYKP34925 604 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 GLRXP35754 106 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 RPL3P39023 403 aaKnown RBP9.91□□□□□ -0.82
RNF4-216ENST00000511859 SLC1A6P48664 564 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 BST1Q10588 318 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 STX3Q13277 289 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 LSM12Q3MHD2 195 aaKnown RBP9.91□□□□□ -0.82
RNF4-216ENST00000511859 SPDYE7PQ495Y7 208 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 CLEC6AQ6EIG7 209 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 TMEM225Q6GV28 225 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 KRT80Q6KB66 452 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 GPAT4Q86UL3 456 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 MYPOPQ86VE0 399 aaPredicted RBP9.91□□□□□ -0.82
RNF4-216ENST00000511859 TMEM99Q8N816 258 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 SFXN5Q8TD22 340 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 PKP2Q99959 881 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 LINC00470Q9BZP3 86 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 C20orf27Q9GZN8 174 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 MMP27Q9H306 513 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 NELFAQ9H3P2 528 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 CRLF2Q9HC73 371 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 TMED5Q9Y3A6 229 aa9.91□□□□□ -0.82
RNF4-216ENST00000511859 TMED7-TICAM2A0A0A6YYA0 188 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 DNAJC9-AS1A6NH13 148 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 AQP7P3A6NL99 342 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 TMEM229AB2RXF0 380 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 RPL36A-HNRNPH2H7BZ11 118 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 CLDN34H7C241 214 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.82
RNF4-216ENST00000511859 RP2O75695 350 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 GUSBP08236 651 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 IDH2P48735 452 aaKnown RBP9.9□□□□□ -0.82
RNF4-216ENST00000511859 SELENOPP49908 381 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 POLR2HP52434 150 aaKnown RBP9.9□□□□□ -0.82
RNF4-216ENST00000511859 GYS2P54840 703 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 ABCE1P61221 599 aaKnown RBP9.9□□□□□ -0.82
RNF4-216ENST00000511859 BAMBIQ13145 260 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 ARHGAP11BQ3KRB8 267 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
RNF4-216ENST00000511859 SAXO2Q658L1 398 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 CREB3L2Q70SY1 520 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 LINGO2Q7L985 606 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 OR5D16Q8NGK9 328 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 CLHC1Q8NHS4 586 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 ALKBH3Q96Q83 286 aaPredicted RBP9.9□□□□□ -0.82
RNF4-216ENST00000511859 C1QTNF5Q9BXJ0 243 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 EXOSC3Q9NQT5 275 aaKnown RBP9.9□□□□□ -0.82
RNF4-216ENST00000511859 OPN4Q9UHM6 478 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 ATP6V1HQ9UI12 483 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 ZDHHC2Q9UIJ5 367 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 OSGIN1Q9UJX0 560 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 MKLN1Q9UL63 735 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 TMED7Q9Y3B3 224 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 NOX1Q9Y5S8 564 aa9.9□□□□□ -0.82
RNF4-216ENST00000511859 CENPVL1A0A0U1RR11 272 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 A0A1B0GUS0 222 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 TMEM72A0PK05 275 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 TMEM114B3SHH9 223 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 UPK3AO75631 287 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 AKR7A3O95154 331 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 MATN1P21941 496 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 ALDH3B1P43353 468 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 SEC24CP53992 1094 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 ROR2Q01974 943 aaKnown RBP9.89□□□□□ -0.83
RNF4-216ENST00000511859 GUCY1A3Q02108 690 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 NPRL3Q12980 569 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 CEACAM7Q14002 265 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 RFTN2Q52LD8 501 aaPredicted RBP9.89□□□□□ -0.83
RNF4-216ENST00000511859 RETREG3Q86VR2 466 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 ARFGAP2Q8N6H7 521 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 ZNF781Q8N8C0 355 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 LRRC8CQ8TDW0 803 aa9.89□□□□□ -0.83
RNF4-216ENST00000511859 POP5Q969H6 163 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms