RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MMP21Q8N119 569 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 JAGN1Q8N5M9 183 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 ZNF283Q8N7M2 679 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 OR5AP2Q8NGF4 316 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 KCTD13Q8WZ19 329 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 GALNT14Q96FL9 552 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 WRAP53Q9BUR4 548 aaKnown RBP6.74□□□□□ -1.33
CPNE4-208ENST00000511604 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SLITRK2Q9H156 845 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 UBQLN4Q9NRR5 601 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 IL20RAQ9UHF4 553 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 A0A1W2PPE2 198 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SMCO3A2RU48 225 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 C9J4A7 227 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 M0R036 132 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SEPT4O43236 478 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 OR10H3O60404 316 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 FAM157CP0CG43 387 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 PRPS2P11908 318 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SLC25A4P12235 298 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 PKMP14618 531 aaKnown RBP6.74□□□□□ -1.33
CPNE4-208ENST00000511604 EPB42P16452 691 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 DCTDP32321 178 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 APLNRP35414 380 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 CCR4P51679 360 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 ATXN7L3Q14CW9 347 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-208ENST00000511604 JOSD1Q15040 202 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-208ENST00000511604 HMGN3Q15651 99 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 FAM189A2Q15884 450 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 HYAL4Q2M3T9 481 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 AKR1C8PQ5T2L2 129 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 MARC1Q5VT66 337 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SERPINA13PQ6UXR4 307 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 CERS6Q6ZMG9 384 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 ZNF620Q6ZNG0 422 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 TAF8Q7Z7C8 310 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SYT9Q86SS6 491 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 TMPRSS11BQ86T26 416 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 ZNF610Q8N9Z0 462 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SLC30A7Q8NEW0 376 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 OR2A12Q8NGT7 310 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 ZCCHC10Q8TBK6 192 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 TMED6Q8WW62 240 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 WDR92Q96MX6 357 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 GPA33Q99795 319 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 BOCQ9BWV1 1114 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 LMAN1LQ9HAT1 526 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SAGE1Q9NXZ1 904 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 NUDT4Q9NZJ9 180 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 ABRACLQ9P1F3 81 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 HS3ST4Q9Y661 456 aa6.74□□□□□ -1.33
CPNE4-208ENST00000511604 SIRT4Q9Y6E7 314 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-208ENST00000511604 A0A0U1RQV5 110 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 SURF4O15260 269 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 CTNSO60931 367 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 ZNF821O75541 412 aaPredicted RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 FGBP02675 491 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HKR1P10072 659 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 GZMBP10144 247 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 TPT1P13693 172 aaKnown RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 CD46P15529 392 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 ATF1P18846 271 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HTR2CP28335 458 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 RBM34P42696 430 aaKnown RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 SUCLG1P53597 346 aaKnown RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 COL9A2Q14055 689 aaPredicted RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 ZNF234Q14588 700 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 RPE65Q16518 533 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 ARMC12Q5T9G4 340 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 DRAM2Q6UX65 266 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 TTLL10Q6ZVT0 673 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST2H3AQ71DI3 136 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 SLC16A14Q7RTX9 510 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 UBE3DQ7Z6J8 389 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HMGN2P46Q86SG4 172 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 TRAPPC5Q8IUR0 188 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 CLDN19Q8N6F1 224 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 EID2Q8N6I1 236 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 ADPRHL1Q8NDY3 354 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 NFKBIDQ8NI38 313 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 M1APQ8TC57 530 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 BRIX1Q8TDN6 353 aaKnown RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 CCDC107Q8WV48 283 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 PIK3IP1Q96FE7 263 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 THOC3Q96J01 351 aaKnown RBP6.73□□□□□ -1.33
CPNE4-208ENST00000511604 KIRREL1Q96J84 757 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 MRGPRX3Q96LB0 322 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 FAM83CQ9BQN1 747 aa6.73□□□□□ -1.33
CPNE4-208ENST00000511604 ZNF649Q9BS31 505 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms