RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 TMEM186Q96B77 213 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 TM4SF18Q96CE8 201 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 MED30Q96HR3 178 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 APOPT1Q96IL0 206 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 ZNF582Q96NG8 517 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 OR4F4Q96R69 305 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 NPFFR1Q9GZQ6 430 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 SLC17A5Q9NRA2 495 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 SIRT5Q9NXA8 310 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 GALPQ9UBC7 116 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 BTNL2Q9UIR0 455 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 BAIAP2Q9UQB8 552 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 NDUFAF1Q9Y375 327 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 PCDHGB1Q9Y5G3 927 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 CAPN6Q9Y6Q1 641 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 TNRC6BQ9UPQ9 1833 aaKnown RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 PCNTO95613 3336 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 KMT2BQ9UMN6 2715 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 IGLV3-32A0A0A0MS00 114 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 hCG_1807616A0A1W2PRN6 198 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 K7EM74 188 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 PHF1O43189 567 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 NDUFB3O43676 98 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 CYTIPO60759 359 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 MTRF1O75570 445 aaKnown RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 ABHD16AO95870 558 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 PNPP00491 289 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 PDYNP01213 254 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 FBP1P09467 338 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 RPS2P15880 293 aaKnown RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 CCNOP22674 350 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 IDH2P48735 452 aaKnown RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 CDKN2DP55273 166 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 CLDN8P56748 225 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 CLDN17P56750 224 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 POU3F1Q03052 451 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 FAM27E3Q08E93 113 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 GRB7Q14451 532 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 ZNF239Q16600 458 aaKnown RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 UBAP2Q5T6F2 1119 aaKnown RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 RINLQ6ZS11 566 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 MARCH3Q86UD3 253 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 ARMC8Q8IUR7 673 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 GATSQ8NAP1 163 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 ADPRHL1Q8NDY3 354 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 GJC3Q8NFK1 279 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 OR52P1PQ8NH57 321 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 NPRL2Q8WTW4 380 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 TSPEARQ8WU66 669 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 ANKRD9Q96BM1 317 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 L3HYPDHQ96EM0 354 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 SGTBQ96EQ0 304 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 AURKBQ96GD4 344 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 WFIKKN1Q96NZ8 548 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 SLC35A5Q9BS91 424 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 CENPOQ9BU64 300 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 TRAF4Q9BUZ4 470 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 MMADHCQ9H3L0 296 aaPredicted RBP2.53□□□□□ -2
CLOCK-209ENST00000511124 SEC61A2Q9H9S3 476 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 ZIM2Q9NZV7 527 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 SLC7A7Q9UM01 511 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 ASB4Q9Y574 426 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 PLXNA2O75051 1894 aa2.53□□□□□ -2
CLOCK-209ENST00000511124 KIF26BQ2KJY2 2108 aa2.53□□□□□ -2.01
CLOCK-209ENST00000511124 GOLGB1Q14789 3259 aaKnown RBP2.53□□□□□ -2.01
CLOCK-209ENST00000511124 DOCK4Q8N1I0 1966 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ELOVL7A1L3X0 281 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 E9PBE3 544 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ARPC2O15144 300 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PIP5K1CO60331 668 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PRAMEF4O60810 478 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 INMTO95050 263 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PF4P02776 101 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 THY1P04216 161 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 IGKV3-11P04433 115 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 RPS17P08708 135 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 THRBP10828 461 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 HOXB9P17482 250 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 AGTR1P30556 359 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 BSGP35613 385 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 MNDAP41218 407 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 SLC9A3P48764 834 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TGM4P49221 684 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 RNF144AP50876 292 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 AGFG1P52594 562 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 ZNF136P52737 540 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TNFAIP6P98066 277 aaPredicted RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 IKZF1Q13422 519 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PTPRRQ15256 657 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CHI3L2Q15782 390 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 TMEM44Q2T9K0 475 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 C1orf140Q5VVS0 124 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 PRAMEF9Q5VWM5 478 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 C18orf63Q68DL7 685 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 REEP3Q6NUK4 255 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 FRRS1Q6ZNA5 592 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 CCDC80Q76M96 950 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 COMMD2Q86X83 199 aa2.52□□□□□ -2.01
CLOCK-209ENST00000511124 MEX3DQ86XN8 651 aaKnown RBP2.52□□□□□ -2.01
CLOCK-209ENST00000511124 LRRC17Q8N6Y2 441 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms