RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.965e-7■■■■■ 27
DDX41-211ENST00000510171 A8MVM7 634 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 SPRY1O43609 319 aaPredicted RBP9.02□□□□□ -0.97
DDX41-211ENST00000510171 UPK3AO75631 287 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 DBIP07108 87 aaKnown RBP9.02□□□□□ -0.97
DDX41-211ENST00000510171 CHRM4P08173 479 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 CBR1P16152 277 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 DVL1P1P54792 670 aaPredicted RBP9.02□□□□□ -0.97
DDX41-211ENST00000510171 NME5P56597 212 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 MAGOHP61326 146 aaKnown RBP9.02□□□□□ -0.97
DDX41-211ENST00000510171 HGFACQ04756 655 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 RIN1Q13671 783 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 ADRM1Q16186 407 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 PDCD4Q53EL6 469 aaKnown RBP9.02□□□□□ -0.97
DDX41-211ENST00000510171 NXNQ6DKJ4 435 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 NIPAL3Q6P499 406 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 LRRC74BQ6ZQY2 392 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 RINLQ6ZS11 566 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 ZNF621Q6ZSS3 439 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 SVOPLQ8N434 492 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 MGARPQ8TDB4 240 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 ZFAND2BQ8WV99 257 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 ZBTB9Q96C00 473 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 MAELQ96JY0 434 aaKnown RBP9.02□□□□□ -0.97
DDX41-211ENST00000510171 ALKBH3Q96Q83 286 aaPredicted RBP9.02□□□□□ -0.97
DDX41-211ENST00000510171 LINC00470Q9BZP3 86 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 SEC61A2Q9H9S3 476 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 DYNLRB1Q9NP97 96 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 RASD1Q9Y272 281 aa9.02□□□□□ -0.97
DDX41-211ENST00000510171 TMEM129A0AVI4 362 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 TMEM229AB2RXF0 380 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 B4DSR2 109 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 RFXANKO14593 260 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 WIPF1O43516 503 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 SLC22A3O75751 556 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 VENTXO95231 258 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 IGKV3-15P01624 115 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 C1QCP02747 245 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 ADRA2AP08913 450 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 TFPTP0C1Z6 253 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 ZCCHC18P0CG32 403 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 NR2F1P10589 423 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 KITP10721 976 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 IL12AP29459 219 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 P2RY4P51582 365 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 SH3BGRP55822 239 aaPredicted RBP9.01□□□□□ -0.97
DDX41-211ENST00000510171 COPZ1P61923 177 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 ROR2Q01974 943 aaKnown RBP9.01□□□□□ -0.97
DDX41-211ENST00000510171 BNIP2Q12982 314 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 TRIP10Q15642 601 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 MRPL2Q5T653 305 aaKnown RBP9.01□□□□□ -0.97
DDX41-211ENST00000510171 PRAMEF8Q5VWM4 474 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 PRAMEF7Q5VXH5 474 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 WBP2NLQ6ICG8 309 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 MSANTD1Q6ZTZ1 278 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 LINGO2Q7L985 606 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 EPHX4Q8IUS5 362 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 PEX5LQ8IYB4 626 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 CADM2Q8N3J6 435 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 IL17RDQ8NFM7 739 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 CKAP2Q8WWK9 683 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 TLCD1Q96CP7 247 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 METTL17Q9H7H0 456 aaPredicted RBP9.01□□□□□ -0.97
DDX41-211ENST00000510171 RMND5AQ9H871 391 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 TMBIM4Q9HC24 238 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 SDR39U1Q9NRG7 319 aaPredicted RBP9.01□□□□□ -0.97
DDX41-211ENST00000510171 RLIMQ9NVW2 624 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 THUMPD1Q9NXG2 353 aaKnown RBP9.01□□□□□ -0.97
DDX41-211ENST00000510171 CALML5Q9NZT1 146 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 ZIM2Q9NZV7 527 aa9.01□□□□□ -0.97
DDX41-211ENST00000510171 LYNX1G3V0Z9 82 aa9□□□□□ -0.97
DDX41-211ENST00000510171 RPL36A-HNRNPH2H7BZ11 118 aa9□□□□□ -0.97
DDX41-211ENST00000510171 UBDO15205 165 aa9□□□□□ -0.97
DDX41-211ENST00000510171 ANP32DO95626 131 aa9□□□□□ -0.97
DDX41-211ENST00000510171 GSNP06396 782 aa9□□□□□ -0.97
DDX41-211ENST00000510171 CELA3BP08861 270 aa9□□□□□ -0.97
DDX41-211ENST00000510171 GKN3PP0CG01 181 aa9□□□□□ -0.97
DDX41-211ENST00000510171 LYNX1P0DP58 116 aa9□□□□□ -0.97
DDX41-211ENST00000510171 RPS4Y1P22090 263 aaKnown RBP9□□□□□ -0.97
DDX41-211ENST00000510171 ARR3P36575 388 aa9□□□□□ -0.97
DDX41-211ENST00000510171 ACAA2P42765 397 aaKnown RBP9□□□□□ -0.97
DDX41-211ENST00000510171 CDKN2CP42773 168 aa9□□□□□ -0.97
DDX41-211ENST00000510171 ARF1P84077 181 aaKnown RBP9□□□□□ -0.97
DDX41-211ENST00000510171 IL1RL1Q01638 556 aa9□□□□□ -0.97
DDX41-211ENST00000510171 CCNIQ14094 377 aa9□□□□□ -0.97
DDX41-211ENST00000510171 BEND6Q5SZJ8 279 aaPredicted RBP9□□□□□ -0.97
DDX41-211ENST00000510171 C1orf140Q5VVS0 124 aa9□□□□□ -0.97
DDX41-211ENST00000510171 GLCCI1Q86VQ1 547 aa9□□□□□ -0.97
DDX41-211ENST00000510171 CCDC36Q8IYA8 594 aa9□□□□□ -0.97
DDX41-211ENST00000510171 CDK20Q8IZL9 346 aa9□□□□□ -0.97
DDX41-211ENST00000510171 ITCHQ96J02 903 aa9□□□□□ -0.97
DDX41-211ENST00000510171 NELFAQ9H3P2 528 aa9□□□□□ -0.97
DDX41-211ENST00000510171 CRLF2Q9HC73 371 aa9□□□□□ -0.97
DDX41-211ENST00000510171 P2RX2Q9UBL9 471 aa9□□□□□ -0.97
DDX41-211ENST00000510171 CMAHPQ9Y471 501 aa9□□□□□ -0.97
DDX41-211ENST00000510171 PLCE1Q9P212 2302 aa9□□□□□ -0.97
DDX41-211ENST00000510171 A0A096LPI6 279 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 IGHV2OR16-5A0A0B4J2B6 119 aa8.99□□□□□ -0.97
DDX41-211ENST00000510171 CDHR4A6H8M9 788 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms