RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 ZNF12P17014 697 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ATP6V1C1P21283 382 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 DRD4P21917 467 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 NR4A1P22736 598 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 MSX2P35548 267 aaPredicted RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 GLRXP35754 106 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 KCNJ1P48048 391 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 P2RX1P51575 399 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 NCBP2P52298 156 aaKnown RBP eCLIP3.25□□□□□ -1.895e-11■■■□□ 14.7
RNF4-211ENST00000509206 SLC16A1P53985 500 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 PRKAG1P54619 331 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 BPIFB3P59826 476 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 TRA2BP62995 288 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 MERTKQ12866 999 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 TBX2Q13207 712 aaPredicted RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 PDE7AQ13946 482 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 CRYMQ14894 314 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 HEPACAMQ14CZ8 416 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 TSTQ16762 297 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 TIGD2Q4W5G0 525 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ESCO2Q56NI9 601 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 SPANXN3Q5MJ09 141 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 PAQR6Q6TCH4 344 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 TMEM107Q6UX40 140 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 LRIG3Q6UXM1 1119 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 BRD3OSQ6XYD6 125 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 Q6ZSV7 163 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 USP51Q70EK9 711 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 CBLL1Q75N03 491 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 RNF144BQ7Z419 303 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 SZRD1Q7Z422 152 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 MTERF4Q7Z6M4 381 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 LYSMD2Q8IV50 215 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 GALNT4Q8N4A0 578 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 SPICQ8N5J4 248 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ZNF614Q8N883 585 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 DTX3Q8N9I9 347 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ZSCAN4Q8NAM6 433 aaPredicted RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 ZNF527Q8NB42 609 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 PDPRQ8NCN5 879 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 CPEB3Q8NE35 698 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 Q8NFD4 153 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 OR1K1Q8NGR3 316 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 OR6Y1Q8NGX8 325 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 OR4C3Q8NH37 302 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 STAG3L4Q8TBR4 150 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ANKRD49Q8WVL7 239 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 LRTOMTQ8WZ04 291 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 PIK3R3Q92569 461 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 DNAJA3Q96EY1 480 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ZNF681Q96N22 645 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ZNF317Q96PQ6 595 aaPredicted RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 DCLRE1CQ96SD1 692 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 BTBD2Q9BX70 525 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 MRPL1Q9BYD6 325 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 DERL2Q9GZP9 239 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 NMUR2Q9GZQ4 415 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 HOXD1Q9GZZ0 328 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 IQCGQ9H095 443 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 DPAGT1Q9H3H5 408 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 ELOVL6Q9H5J4 265 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 SAP30LQ9HAJ7 183 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 NOX3Q9HBY0 568 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 TMEM165Q9HC07 324 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 EQTNQ9NQ60 294 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 HINT3Q9NQE9 182 aaKnown RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 SLCO1C1Q9NYB5 712 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 NUDT4Q9NZJ9 180 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 TAAR3PQ9P1P4 343 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 IL20RAQ9UHF4 553 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 GRID1Q9ULK0 1009 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 PACSIN2Q9UNF0 486 aaPredicted RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 CARD8Q9Y2G2 431 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 TET2Q6N021 2002 aaPredicted RBP3.25□□□□□ -1.89
RNF4-211ENST00000509206 PCNX3Q9H6A9 2034 aa3.25□□□□□ -1.89
RNF4-211ENST00000509206 A0A087WV62 115 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 ARPC4-TTLL3A0A0A6YYG9 625 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 WI2-2373I1.2A0A1W2PRP0 233 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 ZNF716A6NP11 495 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 C17orf100A8MU93 164 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 H0YL77 283 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 TRAPPC2LH3BP13 241 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 TRAF3IP2O43734 574 aaPredicted RBP3.24□□□□□ -1.89
RNF4-211ENST00000509206 UGDHO60701 494 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 EIF1BO60739 113 aaKnown RBP3.24□□□□□ -1.89
RNF4-211ENST00000509206 JTBO76095 146 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 ZFPL1O95159 310 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 HSPA4LO95757 839 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 IGKV1D-16P01601 117 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 IGLV1-44P01699 117 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 KRT14P02533 472 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 IFNW1P05000 195 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 JUNP05412 331 aaKnown RBP3.24□□□□□ -1.89
RNF4-211ENST00000509206 NGFRP08138 427 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 IGFBP1P08833 259 aaPredicted RBP3.24□□□□□ -1.89
RNF4-211ENST00000509206 CELA3BP08861 270 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 PPIAL4GP0DN37 164 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 PRPS2P11908 318 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 CD79AP11912 226 aa3.24□□□□□ -1.89
RNF4-211ENST00000509206 GFAPP14136 432 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms