RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 MIB2Q96AX9 1013 aa13.16□□□□□ -0.3
TRIM41-204ENST00000508930 TAS2R8Q9NYW2 309 aa13.16□□□□□ -0.3
TRIM41-204ENST00000508930 OR2AT4A6NND4 320 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 CSF1P09603 554 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 DCST2Q5T1A1 773 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 SLC39A11Q8N1S5 342 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 INSM2Q96T92 566 aaPredicted RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 HAO2Q9NYQ3 351 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 UPB1Q9UBR1 384 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 PURGQ9UJV8 347 aaKnown RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 NOP16Q9Y3C1 178 aaKnown RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ARID1BQ8NFD5 2236 aaPredicted RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 F5H0A9 414 aaPredicted RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 FBXO45P0C2W1 286 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 AKAIN1P0CW23 69 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 OR8G3PP0DMU2 310 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 PPP2CBP62714 309 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 PPP2CAP67775 309 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ZNF234Q14588 700 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ARHGAP11BQ3KRB8 267 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 KREMEN2Q8NCW0 462 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ADAD1Q96M93 576 aaKnown RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 NMNAT3Q96T66 252 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 LMAN2LQ9H0V9 348 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ZCCHC4Q9H5U6 513 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ADAM18Q9Y3Q7 739 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 NDUFB2O95178 105 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 CSN2P05814 226 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 CALCBP10092 127 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 MGMTP16455 207 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 DDX6P26196 483 aaKnown RBP eCLIP13.15□□□□□ -0.35e-6■■■■□ 21.6
TRIM41-204ENST00000508930 UBE2IP63279 158 aaKnown RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 EEF1A1P68104 462 aaKnown RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 GUCA2AQ02747 115 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 GXYLT1Q4G148 440 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ALG10BQ5I7T1 473 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 METRNLQ641Q3 311 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 RAB11FIP2Q7L804 512 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 KCT2Q8NC54 265 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 MRI1Q9BV20 369 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 MEPEQ9NQ76 525 aaPredicted RBP13.15□□□□□ -0.3
TRIM41-204ENST00000508930 FBXO34Q9NWN3 711 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 MBD2Q9UBB5 411 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 NDRG3Q9UGV2 375 aa13.15□□□□□ -0.3
TRIM41-204ENST00000508930 MYO7AQ13402 2215 aa13.15□□□□□ -0.31
TRIM41-204ENST00000508930 GPR31O00270 319 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 ZFPL1O95159 310 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 NID1P14543 1247 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 TNFRSF17Q02223 184 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 MRM1Q6IN84 353 aaKnown RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 STAC2Q6ZMT1 411 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 SLC35F3Q8IY50 421 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 EIF4E3Q8N5X7 224 aaKnown RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 BIN3Q9NQY0 253 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 APOBEC3BQ9UH17 382 aaKnown RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 CES1P1Q9UKY3 287 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 A0A0D9SG52 128 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 A0A1B0GWA3 101 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 ZNF860A6NHJ4 632 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 OR52A4PA6NMU1 304 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 THBS1P07996 1170 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 SLC2A5P22732 501 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 MAPK3P27361 379 aaPredicted RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 CMPK1P30085 196 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 SWI5Q1ZZU3 235 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 CST9Q5W186 159 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 RNF44Q7L0R7 432 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 STEAP2Q8NFT2 490 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 GIMAP5Q96F15 307 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 APMAPQ9HDC9 416 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 ZMAT5Q9UDW3 170 aaKnown RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 ERVK-19Q9WJR5 959 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 IGKV1-8A0A0C4DH67 115 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 RFPL4AA6NLU0 287 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 RFPL4AL1F8VTS6 287 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 GLSO94925 669 aaPredicted RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 TACSTD2P09758 323 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 RPA2P15927 270 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 CNR1P21554 472 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 GABRA3P34903 492 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 PRSS3P35030 304 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 CCR2P41597 374 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 NTHL1P78549 312 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 TRMT12Q53H54 448 aaKnown RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 SVBPQ8N300 66 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 OR5AK2Q8NH90 309 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 ZDHHC4Q9NPG8 344 aa13.14□□□□□ -0.31
TRIM41-204ENST00000508930 EXOSC3Q9NQT5 275 aaKnown RBP13.14□□□□□ -0.31
TRIM41-204ENST00000508930 PRSS44E7EML9 344 aa13.13□□□□□ -0.31
TRIM41-204ENST00000508930 F8W036 122 aa13.13□□□□□ -0.31
TRIM41-204ENST00000508930 ABCD4O14678 606 aa13.13□□□□□ -0.31
TRIM41-204ENST00000508930 RORAP35398 523 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms