RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 GOT2P00505 430 aaKnown RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SERPINA7P05543 415 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CXCL8P10145 99 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CD27P26842 260 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 C21orf33P30042 268 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 DUTP33316 252 aaKnown RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC6A9P48067 706 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TAF6P49848 677 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CCL11P51671 97 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 MLLT10P55197 1068 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 RAB8AP61006 207 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SYPL1Q16563 259 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 IMPG1Q17R60 797 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 GRHL2Q6ISB3 625 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 DLK2Q6UY11 383 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC35D2Q76EJ3 337 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 GPSM1Q86YR5 675 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 FAM126BQ8IXS8 530 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PARP8Q8N3A8 854 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 RIBC1Q8N443 379 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 ALLCQ8N6M5 410 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CPEB3Q8NE35 698 aaKnown RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 OR9G4Q8NGQ1 327 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TWIST2Q8WVJ9 160 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 ADAMTS14Q8WXS8 1223 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC47A1Q96FL8 570 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM80Q96HE8 168 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 C1QTNF5Q9BXJ0 243 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 MFSD1Q9H3U5 465 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 MAT2BQ9NZL9 334 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF230Q9UIE0 474 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SIX4Q9UIU6 781 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 VSTM2BA6NLU5 285 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 hCG_2039718K7EN88 272 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 HMGB3O15347 200 aaKnown RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF623O75123 536 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 NXPH3O95157 252 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CLDN7O95471 211 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 FGF19O95750 216 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 MSLNQ13421 630 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 C14orf28Q4W4Y0 310 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CXorf66Q5JRM2 361 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 WASHC2DQ5SRD0 308 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 REP15Q6BDI9 236 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 DNAJC24Q6P3W2 148 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 VWA1Q6PCB0 445 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SPESP1Q6UW49 350 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PQLC2Q6ZP29 291 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TRIM46Q7Z4K8 759 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 GTPBP8Q8N3Z3 284 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 FGF11Q92914 225 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CPB2Q96IY4 423 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PLEKHA4Q9H4M7 779 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 POPDC2Q9HBU9 364 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 IKZF3Q9UKT9 509 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 LRP12Q9Y561 859 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 HELZP42694 1942 aaKnown RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TRAV25A0A0B4J276 109 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SMIM28A0A1B0GU29 152 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 NPEPPSL1A6NEC2 478 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC22A20A6NK97 555 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 DRGXA6NNA5 263 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 C17orf105B2RV13 164 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 KPNA4O00629 521 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PDE6DO43924 150 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SC5DO75845 299 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 OR2C1O95371 312 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PTTG1O95997 202 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 IQCF3P0C7M6 154 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PAFAH1B2P68402 229 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CX3CL1P78423 397 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 MELKQ14680 651 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 C19orf54Q5BKX5 351 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 RNF43Q68DV7 783 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CASP12Q6UXS9 341 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 DPPA4Q7L190 304 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 MMD2Q8IY49 270 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC37A3Q8NCC5 494 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC2A12Q8TD20 617 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 GPR151Q8TDV0 419 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 RORBQ92753 470 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SMARCD2Q92925 531 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 LPPQ93052 612 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 CENPNQ96H22 339 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PGLYRP2Q96PD5 576 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SLC35A5Q9BS91 424 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM175Q9BSA9 504 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 NTMT1Q9BV86 223 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM109Q9BVC6 243 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 IRX2Q9BZI1 471 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 R3HDMLQ9H3Y0 253 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 FOXJ3Q9UPW0 622 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 BAIAP2Q9UQB8 552 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 SIRT4Q9Y6E7 314 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-209ENST00000508871 PLXNA4Q9HCM2 1894 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 FABP12A6NFH5 140 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 UNC119BA6NIH7 251 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF726A6NNF4 738 aa3.58□□□□□ -1.84
NEDD4-209ENST00000508871 HACD1B0YJ81 288 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms