RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TSPAN32Q96QS1 320 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 SNX18Q96RF0 628 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 ALG12Q9BV10 488 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 PPIL3Q9H2H8 161 aaKnown RBP16.02■□□□□ 0.15
SFXN1-208ENST00000507823 PCNX3Q9H6A9 2034 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 COPS3Q9UNS2 423 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 ZNF354AO60765 605 aaPredicted RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 CFIP05156 583 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 ITPKBP27987 946 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 PYCR1P32322 319 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 RANBP1P43487 201 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 TRA2AQ13595 282 aaKnown RBP eCLIP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 IL11RAQ14626 422 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 PAPD4Q6PIY7 484 aaKnown RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 GDPD3Q7L5L3 318 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 JAZF1Q86VZ6 243 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 NR2C2APQ86WQ0 139 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 OR51L1Q8NGJ5 315 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 METTL21AQ8WXB1 218 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 KCTD12Q96CX2 325 aaKnown RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 TAS2R5Q9NYW4 299 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 TMED7-TICAM2A0A0A6YYA0 188 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 ETV2O00321 342 aaPredicted RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 CER1O95813 267 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 HTR3AP46098 478 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 RPS5P46782 204 aaKnown RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 GBX2P52951 348 aaPredicted RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 HCCSP53701 268 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 SGCBQ16585 318 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 MESTQ5EB52 335 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 ZMAT1Q5H9K5 638 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 RPL22L1Q6P5R6 122 aaKnown RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 CPEB2Q7Z5Q1 589 aaKnown RBP16.01■□□□□ 0.15
SFXN1-208ENST00000507823 MESP1Q9BRJ9 268 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 TAS2R10Q9NYW0 307 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 TMED7Q9Y3B3 224 aa16.01■□□□□ 0.15
SFXN1-208ENST00000507823 SCO2O43819 266 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 SELENOFO60613 162 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 WISP1O95388 367 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 HIST1H2ABP04908 130 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 NAA10P41227 235 aaPredicted RBP16■□□□□ 0.15
SFXN1-208ENST00000507823 SIRPAP78324 504 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 BAK1Q16611 211 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 TP53I3Q53FA7 332 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 HBMQ6B0K9 141 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 MZT2AQ6P582 158 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 HIST3H2AQ7L7L0 130 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 SLC16A9Q7RTY1 509 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 MAMDC2Q7Z304 686 aaPredicted RBP16■□□□□ 0.15
SFXN1-208ENST00000507823 TTC9Q92623 222 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 GHSRQ92847 366 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 HIST1H2ACQ93077 130 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 DIRAS2Q96HU8 199 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 PPP1R3EQ9H7J1 279 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 C14orf119Q9NWQ9 140 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 PCDHGB2Q9Y5G2 931 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 TMEM72A0PK05 275 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 FABP12A6NFH5 140 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 ANKUB1A6NFN9 424 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 A8MVM7 634 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 SUSD5O60279 629 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 IL7P13232 177 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 SLC3A1Q07837 685 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 FAM69AQ5T7M9 428 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 SLC23A3Q6PIS1 610 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 PAMR1Q6UXH9 720 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 RPTNQ6XPR3 784 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 TRILQ7L0X0 811 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 BMPERQ8N8U9 685 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 ST8SIA1Q92185 356 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 ITPKCQ96DU7 683 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 UBL7Q96S82 380 aaPredicted RBP16■□□□□ 0.15
SFXN1-208ENST00000507823 WDR54Q9H977 334 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 MARCH7Q9H992 704 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 APMAPQ9HDC9 416 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 OCIAD1Q9NX40 245 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 GRHPRQ9UBQ7 328 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 CPAMD8Q8IZJ3 1885 aa16■□□□□ 0.15
SFXN1-208ENST00000507823 TRAV1-2A0A0B4J238 106 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 SMIM30A4D0T7 59 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 D6RAR5 112 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 DXOO77932 396 aaKnown RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 SERPINA3P01011 423 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 IGHMP01871 453 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 F13BP05160 661 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 SPNP16150 400 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 EVX1P49640 407 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 DUSP3P51452 185 aaPredicted RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 ZFP36L1Q07352 338 aaKnown RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 C1QL3Q5VWW1 255 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 LCN10Q6JVE6 187 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 LYPD8Q6UX82 237 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 FAM131AQ6UXB0 335 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 TIGD4Q8IY51 512 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 OR5L2Q8NGL0 311 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 DUSP19Q8WTR2 217 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 RNF166Q96A37 237 aaPredicted RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 GFM1Q96RP9 751 aaKnown RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 RPRD1BQ9NQG5 326 aaKnown RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 GRIP1Q9Y3R0 1128 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms