RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CHURC1-FNTBB4DL54 471 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 ZFPL1O95159 310 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 CD8AP01732 235 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 EPCAMP16422 314 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 CSF2RBP32927 897 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 PPM1AP35813 382 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 NAA10P41227 235 aaPredicted RBP16.26■□□□□ 0.19
NUP54-205ENST00000507257 RPS15P62841 145 aaKnown RBP16.26■□□□□ 0.19
NUP54-205ENST00000507257 LINC00114Q6XXX2 140 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 CCDC36Q8IYA8 594 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 CDRT4Q8N9R6 151 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 SDR9C7Q8NEX9 313 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 LILRB1Q8NHL6 650 aaPredicted RBP16.26■□□□□ 0.19
NUP54-205ENST00000507257 RNF166Q96A37 237 aaPredicted RBP16.26■□□□□ 0.19
NUP54-205ENST00000507257 SMAD5Q99717 465 aaKnown RBP16.26■□□□□ 0.19
NUP54-205ENST00000507257 TTTY10Q9BZA0 68 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 XKR8Q9H6D3 395 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 TCF7L1Q9HCS4 588 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 APMAPQ9HDC9 416 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 ENTPD2Q9Y5L3 495 aa16.26■□□□□ 0.19
NUP54-205ENST00000507257 ZNF98A6NK75 572 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 ARPC3O15145 178 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 CCL16O15467 120 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 SIX6O95475 246 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 FCER2P06734 321 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 GUSBP08236 651 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 CMPK1P30085 196 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PSMB10P40306 273 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 MAP3K8P41279 467 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 BTN3A2P78410 334 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PLAURQ03405 335 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PCGF3Q3KNV8 242 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 STPG1Q5TH74 334 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 DCAF12L2Q5VW00 463 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 LRRTM1Q86UE6 522 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 OR10K1Q8NGX5 313 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 OR4K13Q8NH42 304 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 NT5CQ8TCD5 201 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 TNFAIP8L1Q8WVP5 186 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 LGR4Q9BXB1 951 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 TEX101Q9BY14 249 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 HDAC8Q9BY41 377 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 TRIM2Q9C040 744 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 HCFC1R1Q9NWW0 138 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 TMEM272A0A1B0GTI8 110 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 A0A1B0GWA3 101 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 TEX46H3BTG2 121 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PEX12O00623 359 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 BRINP1O60477 761 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 KDM4BO94953 1096 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PMS2P2O95744 297 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 IGF2P01344 180 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 AKAIN1P0CW23 69 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 CLDN12P56749 244 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 NANOS3P60323 173 aaKnown RBP16.25■□□□□ 0.19
NUP54-205ENST00000507257 DHCR24Q15392 516 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 RPE65Q16518 533 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 CCDC157Q569K6 752 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 DPY19L2P2Q6ZN68 376 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PAQR7Q86WK9 346 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 KCNRGQ8N5I3 272 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 COX18Q8N8Q8 333 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 CCDC107Q8WV48 283 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 TIMM29Q9BSF4 260 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PBX4Q9BYU1 374 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 PIGMQ9H3S5 423 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 IFT22Q9H7X7 185 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 FLRT3Q9NZU0 649 aa16.25■□□□□ 0.19
NUP54-205ENST00000507257 USP36Q9P275 1121 aaKnown RBP16.25■□□□□ 0.19
NUP54-205ENST00000507257 SNRNP200O75643 2136 aaKnown RBP16.25■□□□□ 0.19
NUP54-205ENST00000507257 PRR19A6NJB7 356 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 FAM74A7A6NL05 159 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 KCNJ13O60928 360 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 ZNF254O75437 659 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 ZNF432O94892 652 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 OR2F2O95006 317 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 SPDEFO95238 335 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 TACSTD2P09758 323 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 CPMP14384 443 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 CNR1P21554 472 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 ITPKBP27987 946 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 RORAP35398 523 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 MC2RQ01718 297 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 LTBQ06643 244 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 OR2F1Q13607 317 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 FAM74A3Q4VXF1 159 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 LPCAT3Q6P1A2 487 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 ANKRD16Q6P6B7 361 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 NPEPL1Q8NDH3 523 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 OR52E1Q8NGJ3 308 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 HSPA12BQ96MM6 686 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 SYNPO2LQ9H987 977 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 UPB1Q9UBR1 384 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 COL4A2P08572 1712 aa16.24■□□□□ 0.19
NUP54-205ENST00000507257 PRRC2BQ5JSZ5 2229 aaKnown RBP16.24■□□□□ 0.19
NUP54-205ENST00000507257 TRAV14DV4A0A0A6YYC5 116 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 RAB19A4D1S5 217 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 GLCEO94923 617 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 CBX7O95931 251 aa16.23■□□□□ 0.19
NUP54-205ENST00000507257 PLATP00750 562 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms