RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TBRG1Q3YBR2 411 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 C9orf135Q5VTT2 229 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 NIPAL3Q6P499 406 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 ANKRD16Q6P6B7 361 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 SNX32Q86XE0 403 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 EPHX4Q8IUS5 362 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 OR10H5Q8NGA6 315 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 OR1K1Q8NGR3 316 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 TSPEARQ8WU66 669 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 SIKE1Q9BRV8 207 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 MYOZ1Q9NP98 299 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 TRIM33Q9UPN9 1127 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 ANGPT4Q9Y264 503 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 FKBP7Q9Y680 259 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 JMJD1CQ15652 2540 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 VPS13CQ709C8 3753 aa12.62□□□□□ -0.39
HMGCS1-203ENST00000507004 TRAV36DV7A0A075B6V5 113 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 A0A1W2PR80 420 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 HMGB1P1B2RPK0 211 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 NR5A2O00482 541 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 NUDT7P0C024 238 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 EFNA4P52798 201 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 AQP5P55064 265 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 SNRPD2P62316 118 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 LOXL1Q08397 574 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 ALG10BQ5I7T1 473 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 H1FNTQ75WM6 255 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 RANBP3LQ86VV4 465 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 FUNDC1Q8IVP5 155 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC30A8Q8IWU4 369 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 SCAIQ8N9R8 606 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 HIPK4Q8NE63 616 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 PIK3C3Q8NEB9 887 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 IL17RDQ8NFM7 739 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 OR4F15Q8NGB8 312 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 NFKBIDQ8NI38 313 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 PROX1Q92786 737 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 MAL2Q969L2 176 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC25A36Q96CQ1 311 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC38A2Q96QD8 506 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 PTDSS2Q9BVG9 487 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC25A37Q9NYZ2 338 aa12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 CRNNQ9UBG3 495 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 LEF1Q9UJU2 399 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-203ENST00000507004 A0A1B0GWA3 101 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 NDUFS8O00217 210 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 FMO6PO60774 539 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 IFNA2P01563 188 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 CDH2P19022 906 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 RPS5P46782 204 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 SELENOPP49908 381 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 RGS8P57771 180 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 EGR4Q05215 589 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 SPOCK1Q08629 439 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 SCARB2Q14108 478 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 AGKQ53H12 422 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 B3GLCTQ6Y288 498 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 GPR137CQ8N3F9 429 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 C11orf65Q8NCR3 313 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 FAM168AQ92567 244 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 ALKBH3Q96Q83 286 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 C1QTNF6Q9BXI9 259 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 ASPNQ9BXN1 380 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 SLCO1B3Q9NPD5 702 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 INTS9Q9NV88 658 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 VAPAQ9P0L0 249 aa12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-203ENST00000507004 A0A087WUJ7 227 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 TRBV5-3A0A0A0MS03 114 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 B9A039 149 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ATP6V1G2-DDX39BF2Z307 99 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 NDUFS7O75251 213 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ENTPD5O75356 428 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ZNF432O94892 652 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 LGI1O95970 557 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 C8BP07358 591 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ARR3P36575 388 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 CLDN17P56750 224 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC25A3Q00325 362 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ROR2Q01974 943 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 KRTAP1-1Q07627 177 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 HIKESHIQ53FT3 197 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ARMC8Q8IUR7 673 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 KTI12Q96EK9 354 aaPredicted RBP12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 LRR1Q96L50 414 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 EBF4Q9BQW3 602 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 TMEM43Q9BTV4 400 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 VIPAS39Q9H9C1 493 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 B3GAT2Q9NPZ5 323 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 SLC52A3Q9NQ40 469 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ARGLU1Q9NWB6 273 aaPredicted RBP12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 MOKQ9UQ07 419 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 NDUFAF1Q9Y375 327 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
HMGCS1-203ENST00000507004 A8MV72 311 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms