RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 ESRRGP62508 458 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 RPS15P62841 145 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 RAD51Q06609 339 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 RASGEF1BQ0VAM2 473 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 APOFQ13790 326 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 RCAN2Q14206 197 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 TAF1AQ15573 450 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 MS4A13Q5J8X5 152 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 CDKL4Q5MAI5 379 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF678Q5SXM1 525 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 LYPLAL1Q5VWZ2 237 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 REP15Q6BDI9 236 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 LCN8Q6JVE9 175 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 PYHIN1Q6K0P9 492 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 ERICH5Q6P6B1 374 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 UGT2A3Q6UWM9 527 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 GFRALQ6UXV0 394 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 LHFPL4Q7Z7J7 247 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 DHFR2Q86XF0 187 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 LSMEM2Q8N112 164 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 CCNYL1Q8N7R7 359 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 TMEM99Q8N816 258 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF557Q8N988 423 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 SMYD1Q8NB12 490 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 SYT14Q8NB59 555 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 TRPV3Q8NET8 790 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR4K1Q8NGD4 311 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR13J1Q8NGT2 312 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 MITD1Q8WV92 249 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 TMEM45BQ96B21 275 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 PPP1R14BQ96C90 147 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 DGCR14Q96DF8 476 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 LGALS12Q96DT0 336 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 MSANTD3Q96H12 275 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 SENP5Q96HI0 755 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 CELF6Q96J87 481 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 SGK494Q96LW2 274 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF597Q96LX8 424 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 RPRD1AQ96P16 312 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 SH3GL1Q99961 368 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 RTP3Q9BQQ7 232 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 TMEM175Q9BSA9 504 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 RBM24Q9BX46 236 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 ANKRD60Q9BZ19 345 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 WDR55Q9H6Y2 383 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 C8orf33Q9H7E9 229 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 CAB39LQ9H9S4 337 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 SDR39U1Q9NRG7 319 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 DDX28Q9NUL7 540 aaKnown RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 NUDT4Q9NZJ9 180 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 ADA2Q9NZK5 511 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 TMEM181Q9P2C4 612 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 UXTQ9UBK9 157 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 P2RX2Q9UBL9 471 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 CIDEBQ9UHD4 219 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZDHHC2Q9UIJ5 367 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 CA5BQ9Y2D0 317 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR2W1Q9Y3N9 320 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 TMED3Q9Y3Q3 217 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 AP4S1Q9Y587 144 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 SPIN1Q9Y657 262 aaPredicted RBP3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 VWA8A3KMH1 1905 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 PLXNA4Q9HCM2 1894 aa3.79□□□□□ -1.8
CALCOCO2-208ENST00000506971 A0A087WXM4 84 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 A0A0J9YYE9 177 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 A0A1W2PP18 115 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 DHRS12A0PJE2 317 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 BTBD17A6NE02 478 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 AKR7A2O43488 359 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 RNF13O43567 381 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 SYT7O43581 403 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 RNASEH1O60930 286 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 SUPT7LO94864 414 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 H6PDO95479 791 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 HPRP00739 348 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 RPS17P08708 135 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 HIST1H2AGP0C0S8 130 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZDHHC11BP0C7U3 371 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 GFAPP14136 432 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 CD1DP15813 335 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF23P17027 643 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 XRCC1P18887 633 aaPredicted RBP3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 FASP25445 335 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 OR1E1P30953 314 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 SRD5A2P31213 254 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 ATP5C1P36542 298 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 ALDH3B1P43353 468 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 TUFMP49411 452 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 SEC61GP60059 68 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 AP1S1P61966 158 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 ERVK-8P63133 956 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 MRPS22P82650 360 aaKnown RBP3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 ZNF33BQ06732 778 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 GPR17Q13304 367 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 CDH18Q13634 790 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 ENPP2Q13822 863 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 GTF2H2Q13888 395 aa3.78□□□□□ -1.8
CALCOCO2-208ENST00000506971 CEACAM7Q14002 265 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms