RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PDZK1IP1Q13113 114 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 MICBQ29980 383 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 CARD16Q5EG05 197 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 C1orf94Q6P1W5 598 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF880Q6PDB4 577 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 C19orf35Q6ZS72 473 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 PGAP1Q75T13 922 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 NLRP9Q7RTR0 991 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF546Q86UE3 836 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 MMAAQ8IVH4 418 aaKnown RBP1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 OR52P1PQ8NH57 321 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 ACTRT1Q8TDG2 376 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 OSTF1Q92882 214 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 PELI1Q96FA3 418 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 ULBP2Q9BZM5 246 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 KRT23Q9C075 422 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 DBNDD1Q9H9R9 158 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 NOX3Q9HBY0 568 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 NPIPA1Q9UND3 350 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 MFHAS1Q9Y4C4 1052 aa1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 F11RQ9Y624 299 aaKnown RBP1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 TET2Q6N021 2002 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 NUP214P35658 2090 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P29-201ENST00000505659 A0A1W2PNV4 684 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 C12orf71A8MTZ7 269 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF705GA8MUZ8 300 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 LOC110117498-PIK3R3F6TDL0 507 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 BET1O15155 118 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 ALDOBP05062 364 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 ARF4P18085 180 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 HMGCS1Q01581 520 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 FZD2Q14332 565 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF679Q8IYX0 411 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 SLC38A6Q8IZM9 456 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF619Q8N2I2 560 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 C15orf56Q8N910 161 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 OR5W2Q8NH69 310 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 OR1F12Q8NHA8 337 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 RAET1EQ8TD07 263 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 SPRYD4Q8WW59 207 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 AMDHD1Q96NU7 426 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF416Q9BWM5 594 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 SPNS1Q9H2V7 528 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 OR12D3Q9UGF7 316 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 GGA2Q9UJY4 613 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 RPL36Q9Y3U8 105 aaKnown RBP1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 PLA2R1Q13018 1463 aa1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 SF3B1O75533 1304 aaKnown RBP eCLIP1.61□□□□□ -2.15
HMGB1P29-201ENST00000505659 COL27A1Q8IZC6 1860 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 A0A087WZY1 265 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 PRSS37A4D1T9 235 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 CCER2I3L3R5 266 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 RGS16O15492 202 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 ADRA2AP08913 450 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 CALCBP10092 127 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 STMN1P16949 149 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 GDI1P31150 447 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 MAP3K8P41279 467 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 TDO2P48775 406 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 KLHL30Q0D2K2 578 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 PDIA2Q13087 525 aaKnown RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 UBE2SQ16763 222 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 TMEM41BQ5BJD5 291 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 VAX1Q5SQQ9 334 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 PRR9Q5T870 116 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 PYHIN1Q6K0P9 492 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 BLOC1S2Q6QNY1 142 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 AFTPHQ6ULP2 937 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 SHISA6Q6ZSJ9 500 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 CENPLQ8N0S6 344 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 ARRDC1Q8N5I2 433 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 OR2G3Q8NGZ4 309 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 ZNF461Q8TAF7 563 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 ACOT11Q8WXI4 607 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 ESR2Q92731 530 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 EXOSC8Q96B26 276 aaKnown RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 SH3YL1Q96HL8 342 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 SECISBP2Q96T21 854 aaKnown RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 RNF2Q99496 336 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 RIOK2Q9BVS4 552 aaKnown RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 CAPS2Q9BXY5 557 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 ELOVL3Q9HB03 270 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 THUMPD1Q9NXG2 353 aaKnown RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 KCNIP1Q9NZI2 227 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 COPS3Q9UNS2 423 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 NFASCO94856 1347 aa1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 MN1Q10571 1320 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P29-201ENST00000505659 TRAV40A0A0B4J280 105 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 C7orf66A4D0T2 115 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 SLC31A2O15432 143 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 PRPSAP2O60256 369 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 SRP72O76094 671 aaKnown RBP1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 RCBTB2O95199 551 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 IGKV4-1P06312 121 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 IGHV3-43DP0DP04 118 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 HPGDP15428 266 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 IL10P22301 178 aa1.59□□□□□ -2.15
HMGB1P29-201ENST00000505659 PAX7P23759 505 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms