RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ZCCHC18P0CG32 403 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 HNRNPCL4P0DMR1 293 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 SELENOPP49908 381 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 MVDP53602 400 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 ACTG1P63261 375 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 IL1RL1Q01638 556 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 ZSWIM7Q19AV6 140 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 IQCCQ4KMZ1 466 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 PDLIM3Q53GG5 364 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 MSANTD1Q6ZTZ1 278 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 FBXO17Q96EF6 278 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 MAELQ96JY0 434 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 SPATA9Q9BWV2 254 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 RAD21L1Q9H4I0 556 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 SDR39U1Q9NRG7 319 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 IFT52Q9Y366 437 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 FKBP7Q9Y680 259 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 MGAM2Q2M2H8 2515 aa13.96□□□□□ -0.18
PDLIM7-213ENST00000505074 ARFGEF3Q5TH69 2177 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 A0A096LPI6 279 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 IGHV4-61A0A0C4DH41 118 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 VAMP5O95183 116 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 APOBEC3AP31941 199 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 RPS5P46782 204 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 COMPP49747 757 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 HOXC5Q00444 222 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 LGALS3BPQ08380 585 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 SLC2A7Q6PXP3 512 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 MAVSQ7Z434 540 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 ZIC4Q8N9L1 334 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 RNF217Q8TC41 542 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 MAL2Q969L2 176 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 OCEL1Q9H607 264 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 TMEFF2Q9UIK5 374 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 RASD1Q9Y272 281 aa13.95□□□□□ -0.18
PDLIM7-213ENST00000505074 TGP01266 2768 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 CLIC1O00299 241 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 ERLIN1O75477 346 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 NUDT7P0C024 238 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 ZNF23P17027 643 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 SNRPD2P62316 118 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 TUBA1BP68363 451 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 TUBA4AP68366 448 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 RGNQ15493 299 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 CARTPTQ16568 116 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 TBRG1Q3YBR2 411 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 VHLLQ6RSH7 139 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 CREB3L2Q70SY1 520 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 TUBA1AQ71U36 451 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 KDM8Q8N371 416 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 GOLGA6L1Q8N7Z2 621 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 OR1K1Q8NGR3 316 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 BBS10Q8TAM1 723 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 STK35Q8TDR2 534 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 FOXN4Q96NZ1 517 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 SLC38A2Q96QD8 506 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 PIF1Q9H611 641 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 PCDHB14Q9Y5E9 798 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 USH1CQ9Y6N9 552 aa13.94□□□□□ -0.18
PDLIM7-213ENST00000505074 A0A096LPE4 126 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 IGHV1-18A0A0C4DH31 117 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 A0A1W2PPZ6 126 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 LOC390937A0A1W2PQ73 354 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 OR6C65A6NJZ3 312 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 POLR3GO15318 223 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 VENTXO95231 258 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 CRYAAP02489 173 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 PNMTP11086 282 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 ZNF43P17038 809 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 SLC18A1P54219 525 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 CLDN17P56750 224 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 NCALDP61601 193 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 C1DQ13901 141 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 SLC46A3Q7Z3Q1 461 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 ZNF540Q8NDQ6 660 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 GTF2H4Q92759 462 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 GCDHQ92947 438 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 VRK1Q99986 396 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 PAIP1Q9H074 479 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 MYOZ1Q9NP98 299 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 A4GALTQ9NPC4 353 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 OBP2BQ9NPH6 170 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 PRDM4Q9UKN5 801 aa13.93□□□□□ -0.18
PDLIM7-213ENST00000505074 TMEM229AB2RXF0 380 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 NR5A2O00482 541 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 UPK3AO75631 287 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 CBLP22681 906 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 P2RY4P51582 365 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 ROR2Q01974 943 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 FADDQ13158 208 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 C1QTNF12Q5T7M4 302 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 EPHX4Q8IUS5 362 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 MFSD8Q8NHS3 518 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 NFKBIDQ8NI38 313 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 KTI12Q96EK9 354 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 SOX7Q9BT81 388 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 TMBIM4Q9HC24 238 aa13.92□□□□□ -0.18
PDLIM7-213ENST00000505074 TCF7L2Q9NQB0 619 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms