RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 VANGL1Q8TAA9 524 aaPredicted RBP8.75□□□□□ -1.01
NR1I3-220ENST00000505005 LIPHQ8WWY8 451 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 NINJ1Q92982 152 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 BOD1Q96IK1 185 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 NPAS1Q99742 590 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 LINC00470Q9BZP3 86 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 OPN3Q9H1Y3 402 aaPredicted RBP8.75□□□□□ -1.01
NR1I3-220ENST00000505005 ESRP2Q9H6T0 727 aaKnown RBP8.75□□□□□ -1.01
NR1I3-220ENST00000505005 C12orf49Q9H741 205 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 YY1AP1Q9H869 796 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 DCAF13Q9NV06 445 aaKnown RBP8.75□□□□□ -1.01
NR1I3-220ENST00000505005 ACTR3BQ9P1U1 418 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 MALT1Q9UDY8 824 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 RIMS3Q9UJD0 308 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 MGAT4BQ9UQ53 548 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 SNX13Q9Y5W8 968 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 FLVCR1Q9Y5Y0 555 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 COL12A1Q99715 3063 aa8.75□□□□□ -1.01
NR1I3-220ENST00000505005 FAM221AA4D161 298 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 NPIPB13A6NJU9 1138 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 CPSF4LA6NMK7 179 aaKnown RBP8.74□□□□□ -1.01
NR1I3-220ENST00000505005 VSTM5A8MXK1 200 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 NPIPB4C9JG80 1138 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 FTCDNL1E5RQL4 147 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 ZNF587BE7ETH6 402 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 M0R3H8 397 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 GCM2O75603 506 aaPredicted RBP8.74□□□□□ -1.01
NR1I3-220ENST00000505005 KRT36O76013 467 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 AKR7A3O95154 331 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 SERPINA1P01009 418 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 CRYGSP22914 178 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 HTR2AP28223 471 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 MPGP29372 298 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 GUCA1AP43080 201 aaPredicted RBP8.74□□□□□ -1.01
NR1I3-220ENST00000505005 PRPS1P60891 318 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 IL1RL1Q01638 556 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 PUDPQ08623 228 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 FAM27E3Q08E93 113 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 FXNQ16595 210 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 EXOC3L2Q2M3D2 409 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 CASP12Q6UXS9 341 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 STAC2Q6ZMT1 411 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 DEF8Q6ZN54 512 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 CREB3L2Q70SY1 520 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 DPPA2Q7Z7J5 298 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 TMEM200AQ86VY9 491 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 C10orf67Q8IYJ2 551 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 DEFB107AQ8IZN7 70 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 OFCC1Q8IZS5 231 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 GABRG1Q8N1C3 465 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 TMEM99Q8N816 258 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 GPR32P1Q8NGA4 272 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 TMEM239Q8WW34 195 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 PYURFQ96I23 114 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 LRGUKQ96M69 825 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 ZNF426Q9BUY5 554 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 POLDIP3Q9BY77 421 aaKnown RBP8.74□□□□□ -1.01
NR1I3-220ENST00000505005 SLCO5A1Q9H2Y9 848 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 DENND2DQ9H6A0 471 aaPredicted RBP8.74□□□□□ -1.01
NR1I3-220ENST00000505005 RASSF1Q9NS23 344 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 TAS2R1Q9NYW7 299 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 CRIM1Q9NZV1 1036 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 FBXO9Q9UK97 447 aaPredicted RBP8.74□□□□□ -1.01
NR1I3-220ENST00000505005 FBXL3Q9UKT7 428 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 SLC7A7Q9UM01 511 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 CLEC4AQ9UMR7 237 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 AMDHD2Q9Y303 409 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 TESMINQ9Y4I5 508 aa8.74□□□□□ -1.01
NR1I3-220ENST00000505005 MPDZO75970 2070 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 IGHV3-15A0A0B4J1V0 119 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 A0A1W2PRG6 482 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 KDM4EB2RXH2 506 aaPredicted RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 C19orf84I3L1E1 186 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 GYG2O15488 501 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 CTAG2O75638 210 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 ADAP00813 363 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 UMPSP11172 480 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 COL8A1P27658 744 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 GRPRP30550 384 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 DAP3P51398 398 aaKnown RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 EGR4Q05215 589 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 TRAP1Q12931 704 aaKnown RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 TRIM25Q14258 630 aaKnown RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 CDSNQ15517 529 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 FAM205BPQ63HN1 556 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 HMBOX1Q6NT76 420 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 BHLHA15Q7RTS1 189 aaPredicted RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 NUFIP2Q7Z417 695 aaKnown RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 NANOGNBQ7Z5D8 188 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 CCDC103Q8IW40 242 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 GPR137CQ8N3F9 429 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 IL17RDQ8NFM7 739 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 MAGEE2Q8TD90 523 aaPredicted RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 ACOT11Q8WXI4 607 aaPredicted RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 TAAR8Q969N4 342 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 KTI12Q96EK9 354 aaPredicted RBP8.73□□□□□ -1.01
NR1I3-220ENST00000505005 SGTBQ96EQ0 304 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 KLHDC3Q9BQ90 382 aa8.73□□□□□ -1.01
NR1I3-220ENST00000505005 ACTR6Q9GZN1 396 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms