RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 ABHD12BQ7Z5M8 362 aaPredicted RBP11.99□□□□□ -0.49
HOXC6-203ENST00000504315 PATL1Q86TB9 770 aaKnown RBP11.99□□□□□ -0.49
HOXC6-203ENST00000504315 RANBP3LQ86VV4 465 aaPredicted RBP11.99□□□□□ -0.49
HOXC6-203ENST00000504315 ANKK1Q8NFD2 765 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 OR8J3Q8NGG0 315 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 OR10A6Q8NH74 314 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 SMAP2Q8WU79 429 aaPredicted RBP11.99□□□□□ -0.49
HOXC6-203ENST00000504315 TAAR8Q969N4 342 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 SLC25A36Q96CQ1 311 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 COX4I2Q96KJ9 171 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 Q96MF0 132 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 OXGR1Q96P68 337 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 ZNF317Q96PQ6 595 aaPredicted RBP11.99□□□□□ -0.49
HOXC6-203ENST00000504315 TMEM43Q9BTV4 400 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 PCDHAC1Q9H158 963 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 GSX1Q9H4S2 264 aaPredicted RBP11.99□□□□□ -0.49
HOXC6-203ENST00000504315 NANOGQ9H9S0 305 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 TMEM27Q9HBJ8 222 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 SAR1AQ9NR31 198 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 SEC14L4Q9UDX3 406 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 SLC13A4Q9UKG4 626 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 LAMP3Q9UQV4 416 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 CORINQ9Y5Q5 1042 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 MAGED1Q9Y5V3 778 aaPredicted RBP11.99□□□□□ -0.49
HOXC6-203ENST00000504315 HIVEP2P31629 2446 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 NF1P21359 2839 aa11.99□□□□□ -0.49
HOXC6-203ENST00000504315 NIPBLQ6KC79 2804 aaeCLIP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 BBIP1A8MTZ0 92 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 RPL36A-HNRNPH2H7BZ11 118 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 M0QX08 132 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 M0R082 166 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 BGLAPP02818 100 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 CD247P20963 164 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 GTF2E2P29084 291 aaKnown RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 GRPRP30550 384 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 CRYBA2P53672 197 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 ATP5J2P56134 94 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 KLF10Q13118 480 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 CYLC2Q14093 348 aaPredicted RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 NPTX1Q15818 432 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 VMACQ2NL98 169 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 INTS11Q5TA45 600 aaKnown RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 C9orf135Q5VTT2 229 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 NIPAL3Q6P499 406 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 LINC00114Q6XXX2 140 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 H1FNTQ75WM6 255 aaPredicted RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 CCDC80Q76M96 950 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 LINGO2Q7L985 606 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 CALHM3Q86XJ0 350 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 SCAIQ8N9R8 606 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 SMYD1Q8NB12 490 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 OR6T1Q8NGN1 323 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 ZNF417Q8TAU3 575 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 TAMM41Q96BW9 452 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 ALKBH3Q96Q83 286 aaPredicted RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 ZNF587Q96SQ5 575 aaPredicted RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 EPYCQ99645 322 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 SH3GL1Q99961 368 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 BDH2Q9BUT1 245 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 TRAF4Q9BUZ4 470 aaPredicted RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 OBP2BQ9NPH6 170 aa11.98□□□□□ -0.49
HOXC6-203ENST00000504315 CISD1Q9NZ45 108 aaKnown RBP11.98□□□□□ -0.49
HOXC6-203ENST00000504315 A0A1W2PR80 420 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 ZNF587BE7ETH6 402 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 M0R3H8 397 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 TRAF3IP2O43734 574 aaPredicted RBP11.97□□□□□ -0.49
HOXC6-203ENST00000504315 UPK3AO75631 287 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 CD8AP01732 235 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 OPN1SWP03999 348 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 ZNF43P17038 809 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 PAX7P23759 505 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 CDH11P55287 796 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 CDH12P55289 794 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 GUCY1A3Q02108 690 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 LTBQ06643 244 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 SPOCK1Q08629 439 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 MAPRE2Q15555 327 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 ETFDHQ16134 617 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 REP15Q6BDI9 236 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 CIARTQ8N365 385 aaPredicted RBP11.97□□□□□ -0.49
HOXC6-203ENST00000504315 KDM8Q8N371 416 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 OR4D11Q8NGI4 311 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 MAGEE2Q8TD90 523 aaPredicted RBP11.97□□□□□ -0.49
HOXC6-203ENST00000504315 RASSF5Q8WWW0 418 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 LRRC58Q96CX6 371 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 MCHR1Q99705 422 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 ZNF426Q9BUY5 554 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 NELFAQ9H3P2 528 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 MED4Q9NPJ6 270 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 FAIMQ9NVQ4 179 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 SELENONQ9NZV5 590 aa11.97□□□□□ -0.49
HOXC6-203ENST00000504315 SONP18583 2426 aaKnown RBP11.96□□□□□ -0.49
HOXC6-203ENST00000504315 ARPC4-TTLL3A0A0A6YYG9 625 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 FAM171A2A8MVW0 826 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 MS4A18H0YCH9 400 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 H7C1Q1 480 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 M0R1B8 84 aa11.96□□□□□ -0.49
HOXC6-203ENST00000504315 MRASO14807 208 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms