RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 ETFAP13804 333 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 DAOP14920 347 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 THBS4P35443 961 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 COPZ1P61923 177 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 ROR2Q01974 943 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 EGR4Q05215 589 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 RPS26P11Q5JNZ5 115 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 SERPINA11Q86U17 422 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 ANKK1Q8NFD2 765 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 STK35Q8TDR2 534 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 SLC38A5Q8WUX1 472 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 SEC14L4Q9UDX3 406 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 FBXO9Q9UK97 447 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 RCE1Q9Y256 329 aa12.24□□□□□ -0.45
POLR2J3-207ENST00000503564 IGHV2OR16-5A0A0B4J2B6 119 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 TMEM129A0AVI4 362 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 RFXANKO14593 260 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 AHSA1O95433 338 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 CBR1P16152 277 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 CHN2P52757 468 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 CRISP3P54108 245 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 CLDN17P56750 224 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 ARF1P84077 181 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 BST1Q10588 318 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 MPP2Q14168 576 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 KRT71Q3SY84 523 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 GTDC1Q4AE62 458 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 ZCCHC24Q8N2G6 241 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 KDM8Q8N371 416 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 SVOPLQ8N434 492 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 RFLNBQ8N5W9 214 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 NEU4Q8WWR8 484 aaPredicted RBP12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 HPS1Q92902 700 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 C1orf159Q96HA4 380 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 SPATA9Q9BWV2 254 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 CALML5Q9NZT1 146 aa12.23□□□□□ -0.45
POLR2J3-207ENST00000503564 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 NPR2P20594 1047 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 CDH15P55291 814 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 DSTNP60981 165 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 STX3Q13277 289 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 RIN1Q13671 783 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 LARS2Q15031 903 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 TRIP10Q15642 601 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 LIPNQ5VXI9 398 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 C6orf89Q6UWU4 347 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 SPATA21Q7Z572 469 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 CDK20Q8IZL9 346 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 ZNF786Q8N393 782 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 ZNF837Q96EG3 531 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 TMEM19Q96HH6 336 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 ZBTB18Q99592 522 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 TPT1P8Q9HAU6 139 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 GPR35Q9HC97 309 aa12.22□□□□□ -0.45
POLR2J3-207ENST00000503564 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 TCF21O43680 179 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 TRAF3IP2O43734 574 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 ZCCHC18P0CG32 403 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 ZNF43P17038 809 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 ITGA2P17301 1181 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 EPHA3P29320 983 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 CRATP43155 626 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 RPS5P46782 204 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 HOXC5Q00444 222 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 SNTB2Q13425 540 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 CEACAM16Q2WEN9 425 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 PDCD4Q53EL6 469 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 TNFAIP8L3Q5GJ75 292 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 MDP1Q86V88 176 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 MEX3DQ86XN8 651 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 TMEM123Q8N131 208 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 MREGQ8N565 214 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 LINC01356Q8N9X3 169 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 VPS33AQ96AX1 596 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 SLC25A36Q96CQ1 311 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 KTI12Q96EK9 354 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 SNX18Q96RF0 628 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 NOX3Q9HBY0 568 aa12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 TMEFF2Q9UIK5 374 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-207ENST00000503564 A0A0G2JPF8 293 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 HNRNPCL2B2RXH8 293 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 HNRNPCL3B7ZW38 293 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 M0R082 166 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 SLC43A1O75387 559 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 IL6P05231 212 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 ERCC1P07992 297 aaPredicted RBP12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 HNRNPCL4P0DMR1 293 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 ARR3P36575 388 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 POU3F1Q03052 451 aaPredicted RBP12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 NPRL3Q12980 569 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 ADRM1Q16186 407 aa12.2□□□□□ -0.46
POLR2J3-207ENST00000503564 PHYHD1Q5SRE7 291 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms