RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 GMEB1Q9Y692 573 aa14.2□□□□□ -0.14
SCLT1-204ENST00000503215 A0A096LPE4 126 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 A0A1W2PPZ6 126 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 VGLL3A8MV65 326 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 KRT33AO76009 404 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF432O94892 652 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 GPX2P18283 190 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 GTF2A1P52655 376 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-204ENST00000503215 CLDN17P56750 224 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 SCARB2Q14108 478 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 SELPLGQ14242 412 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 SQLEQ14534 574 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 DHRS4L2Q6PKH6 230 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 FBXL14Q8N1E6 418 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 DYDC1Q8WWB3 177 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 SLC35B4Q969S0 331 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF837Q96EG3 531 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-204ENST00000503215 NELFAQ9H3P2 528 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 SEC61A2Q9H9S3 476 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 INTS9Q9NV88 658 aaKnown RBP14.19□□□□□ -0.14
SCLT1-204ENST00000503215 TMEM45AQ9NWC5 275 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 RPS6KB2Q9UBS0 482 aa14.19□□□□□ -0.14
SCLT1-204ENST00000503215 IGHV1-18A0A0C4DH31 117 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 M0R082 166 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 GPRIN2O60269 458 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 LY6HO94772 140 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 VAMP5O95183 116 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 HPRP00739 348 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 ATP4BP51164 291 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 PPP2R2BQ00005 443 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 MST1LQ2TV78 715 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 RUNDC3AQ59EK9 446 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 RETREG3Q86VR2 466 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 PTOV1Q86YD1 416 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 WDFY1Q8IWB7 410 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 LSMEM1Q8N8F7 131 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF417Q8TAU3 575 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 CKAP2Q8WWK9 683 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 BOD1Q96IK1 185 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF587Q96SQ5 575 aaPredicted RBP14.18□□□□□ -0.14
SCLT1-204ENST00000503215 MDFIQ99750 246 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF385DQ9H6B1 395 aa14.18□□□□□ -0.14
SCLT1-204ENST00000503215 A0A096LNT2 108 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF587BE7ETH6 402 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 FZD7O75084 574 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 GRPRP30550 384 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 ROR2Q01974 943 aaKnown RBP14.17□□□□□ -0.14
SCLT1-204ENST00000503215 ALG10BQ5I7T1 473 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 PHYHD1Q5SRE7 291 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 KLHL24Q6TFL4 600 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 DEPDC4Q8N2C3 294 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF525Q8N782 197 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 SMYD1Q8NB12 490 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 OR10H5Q8NGA6 315 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 ADAD1Q96M93 576 aaKnown RBP14.17□□□□□ -0.14
SCLT1-204ENST00000503215 OXGR1Q96P68 337 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 TMEM38AQ9H6F2 299 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 BARX1Q9HBU1 254 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-204ENST00000503215 KLHL14Q9P2G3 628 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 ARFGEF3Q5TH69 2177 aa14.17□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF503-AS2A6NEH8 195 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 LRRN3E7EW58 273 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 MS4A18H0YCH9 400 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 MFN2O95140 757 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 CELA3BP08861 270 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 HLA-DOBP13765 273 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF43P17038 809 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 PPIBP23284 216 aaKnown RBP14.16□□□□□ -0.14
SCLT1-204ENST00000503215 SLC6A2P23975 617 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 NUDT6P53370 316 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 MTPNP58546 118 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 ARF1P84077 181 aaKnown RBP14.16□□□□□ -0.14
SCLT1-204ENST00000503215 OR1Q1Q15612 314 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 MS4A18Q3C1V0 323 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 ZNF544Q6NX49 715 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 MYPOPQ86VE0 399 aaPredicted RBP14.16□□□□□ -0.14
SCLT1-204ENST00000503215 KRT73Q86Y46 540 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 RNF217Q8TC41 542 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 NANOS1Q8WY41 292 aaKnown RBP14.16□□□□□ -0.14
SCLT1-204ENST00000503215 SLC38A4Q969I6 547 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 MOGAT1Q96PD6 335 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 FKRPQ9H9S5 495 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 C12orf10Q9HB07 376 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 DNHD1Q96M86 4753 aa14.16□□□□□ -0.14
SCLT1-204ENST00000503215 TRAV36DV7A0A075B6V5 113 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 A0A087WUJ7 227 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 A0A0B4J2E0 115 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 A0A1B0GX12 115 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 EVPLLA8MZ36 301 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 M0R3H8 397 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 TRAF3IP2O43734 574 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 SHOX2O60902 331 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 CRLF1O75462 422 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 WNT11O96014 354 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 GTF2E2P29084 291 aaKnown RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 APOBEC3AP31941 199 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 CDH12P55289 794 aa14.15□□□□□ -0.14
SCLT1-204ENST00000503215 RGS8P57771 180 aaPredicted RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 C1DQ13901 141 aaKnown RBP14.15□□□□□ -0.14
SCLT1-204ENST00000503215 RAB35Q15286 201 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms