RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZNF416Q9BWM5 594 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 NTN4Q9HB63 628 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 ADPRHL2Q9NX46 363 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 OPN4Q9UHM6 478 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 J3QLI3 93 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 FAAHO00519 579 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 FRS3O43559 492 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 SCN2BO60939 215 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 SEC14L2O76054 403 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 VAMP5O95183 116 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 XKR7Q5GH72 579 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 AVPI1Q5T686 147 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 ATAD3BQ5T9A4 648 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 IL23RQ5VWK5 629 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 REP15Q6BDI9 236 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 HIST2H2BDQ6DRA6 164 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 SIGLECL1Q8N7X8 197 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 IFT81Q8WYA0 676 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 DUX5Q96PT3 197 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 PRPF18Q99633 342 aaKnown RBP13.36□□□□□ -0.27
HDAC6-236ENST00000498808 GATA5Q9BWX5 397 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-236ENST00000498808 TBK1Q9UHD2 729 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF281Q9Y2X9 895 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 WNK1Q9H4A3 2382 aa13.36□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF432O94892 652 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 AGR2O95994 175 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 CHRNGP07510 517 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 CHRM4P08173 479 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 NAT2P11245 290 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 CPA3P15088 417 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 PRPS1L1P21108 318 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 PRTN3P24158 256 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 FPR2P25090 351 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 GLRXP35754 106 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 EPS8Q12929 822 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 BNIP2Q12982 314 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 CEACAM16Q2WEN9 425 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 CCDC153Q494R4 210 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 DCAF12L2Q5VW00 463 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 PRAMEF8Q5VWM4 474 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 PRAMEF7Q5VXH5 474 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 OR4F3Q6IEY1 312 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 ANKK1Q8NFD2 765 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 C3orf30Q96M34 536 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 C1orf147Q96MC9 270 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-236ENST00000498808 TAPBPLQ9BX59 468 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 GPR35Q9HC97 309 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 B3GNT2Q9NY97 397 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-236ENST00000498808 ZDHHC2Q9UIJ5 367 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 FZR1Q9UM11 496 aa13.35□□□□□ -0.27
HDAC6-236ENST00000498808 CFAP73A6NFT4 308 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 DNAJC9-AS1A6NH13 148 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 FGF4P08620 206 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 NUDT17P0C025 328 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF35P13682 527 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 CXCR1P25024 350 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 CASQ1P31415 396 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 MAGEB1P43366 347 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 CAPZA2P47755 286 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 CLDN17P56750 224 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 MVKQ03426 396 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 OCLNQ16625 522 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 GPAT3Q53EU6 434 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 C6orf136Q5SQH8 315 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 C10orf107Q8IVU9 208 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 CMIPQ8IY22 773 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 KDM8Q8N371 416 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 CCDC63Q8NA47 563 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC6-236ENST00000498808 RAB39BQ96DA2 213 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF75AQ96N20 296 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF385DQ9H6B1 395 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 C7orf69Q9H7B7 122 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 MED29Q9NX70 200 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 RCE1Q9Y256 329 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 RASD1Q9Y272 281 aa13.34□□□□□ -0.27
HDAC6-236ENST00000498808 AGAP5A6NIR3 686 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 POM121CA8CG34 1229 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 CDC14BO60729 498 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 IGHV2-5P01817 119 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 HLA-HP01893 362 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 C1QCP02747 245 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 ZNF14P17017 642 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-236ENST00000498808 PCLAFQ15004 111 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 FXNQ16595 210 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 PGS1Q32NB8 556 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 MRPL2Q5T653 305 aaKnown RBP13.33□□□□□ -0.28
HDAC6-236ENST00000498808 SAXO2Q658L1 398 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 DOK3Q7L591 496 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 CCDC36Q8IYA8 594 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 FNDC5Q8NAU1 212 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 OR4A15Q8NGL6 344 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 SLITRK2Q9H156 845 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 SLC38A1Q9H2H9 487 aa13.33□□□□□ -0.28
HDAC6-236ENST00000498808 A8MVM7 634 aa13.32□□□□□ -0.28
HDAC6-236ENST00000498808 RNASET2O00584 256 aaKnown RBP13.32□□□□□ -0.28
HDAC6-236ENST00000498808 RIPK2O43353 540 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms