RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 EFL1Q7Z2Z2 1120 aaKnown RBP3.13□□□□□ -1.91
VPS36-206ENST00000497149 ECHDC2Q86YB7 292 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 BHLHE23Q8NDY6 225 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 NDRG1Q92597 394 aaKnown RBP3.13□□□□□ -1.91
VPS36-206ENST00000497149 FCRL1Q96LA6 429 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 LINC00167Q96N53 147 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 ROGDIQ9GZN7 287 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 A0A0G2JN53 185 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 SNTNA6NMZ2 147 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 MPHOSPH10O00566 681 aaKnown RBP3.12□□□□□ -1.91
VPS36-206ENST00000497149 TIMM8AO60220 97 aaPredicted RBP3.12□□□□□ -1.91
VPS36-206ENST00000497149 TNFSF13O75888 250 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 CLDN9O95484 217 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 GIPP09681 153 aaPredicted RBP3.12□□□□□ -1.91
VPS36-206ENST00000497149 ABOP16442 354 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 CMA1P23946 247 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 BTCP35070 178 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 SH3BGRP55822 239 aaPredicted RBP3.12□□□□□ -1.91
VPS36-206ENST00000497149 HMGN5P82970 282 aaKnown RBP3.12□□□□□ -1.91
VPS36-206ENST00000497149 TMED1Q13445 227 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 HSP90B2PQ58FF3 399 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 GPR157Q5UAW9 335 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 CTRB2Q6GPI1 263 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 UTS2BQ765I0 119 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 NBPF5PQ86XG9 351 aaPredicted RBP3.12□□□□□ -1.91
VPS36-206ENST00000497149 FAM83FQ8NEG4 500 aaPredicted RBP3.12□□□□□ -1.91
VPS36-206ENST00000497149 FAM110BQ8TC76 370 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 FANK1Q8TC84 345 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 BLOC1S5Q8TDH9 187 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 TMEM246Q9BRR3 403 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 SLC39A3Q9BRY0 314 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 GON7Q9BXV9 100 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 IL26Q9NPH9 171 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 DCAF16Q9NXF7 216 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 GIN1Q9NXP7 522 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 QPCTLQ9NXS2 382 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 KCNIP1Q9NZI2 227 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 TP53TG5Q9Y2B4 290 aa3.12□□□□□ -1.91
VPS36-206ENST00000497149 A0A1B0GVL5 298 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 A0A1W2PNU3 283 aaPredicted RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 OR5B21A6NL26 309 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 PES1O00541 588 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 RIPK2O43353 540 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 FCMRO60667 390 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 CA11O75493 328 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 TSPAN12O95859 305 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 MOSP00540 346 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 RBMY1A1P0DJD3 496 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 PSG2P11465 335 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 RPS10P46783 165 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 CSNK1DP48730 415 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 OGDHQ02218 1023 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 GPNMBQ14956 572 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 C1orf94Q6P1W5 598 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 C6orf89Q6UWU4 347 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 COX15Q7KZN9 410 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 OTUD6AQ7L8S5 288 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 EGFL6Q8IUX8 553 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 NUDCD3Q8IVD9 361 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 TMEM61Q8N0U2 210 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 ZNF433Q8N7K0 673 aaPredicted RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 ACOT4Q8N9L9 421 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 ACOT11Q8WXI4 607 aaPredicted RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 N4BP2L2Q92802 583 aaPredicted RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 OR2M2Q96R28 347 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 CHRDL1Q9BU40 450 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 RIOK2Q9BVS4 552 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 FN3KRPQ9HA64 309 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 EML4Q9HC35 981 aaKnown RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 ZNF331Q9NQX6 463 aaPredicted RBP3.11□□□□□ -1.91
VPS36-206ENST00000497149 CLCF1Q9UBD9 225 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 RABL2BQ9UNT1 228 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 PIGLQ9Y2B2 252 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 KCNIP3Q9Y2W7 256 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 FANCIQ9NVI1 1328 aa3.11□□□□□ -1.91
VPS36-206ENST00000497149 PHF3Q92576 2039 aaKnown RBP3.1□□□□□ -1.91
VPS36-206ENST00000497149 A6NDX4 124 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 GOLGA8SH3BPF8 625 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 CXCL11O14625 94 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 TOM1O60784 492 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 CRISP2P16562 243 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 CCNCP24863 283 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 LHX2P50458 406 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 MECOMQ03112 1051 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 PDIA2Q13087 525 aaKnown RBP3.1□□□□□ -1.91
VPS36-206ENST00000497149 DGUOKQ16854 277 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 CYB5R2Q6BCY4 276 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 OR2A2Q6IF42 318 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 UQCC3Q6UW78 93 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 ENPP6Q6UWR7 440 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 Q6ZVH6 145 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 ZNF546Q86UE3 836 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 PLA2G4DQ86XP0 818 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 Q8N9W7 124 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 FNDC5Q8NAU1 212 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 OR8J1Q8NGP2 316 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 OR1L4Q8NGR5 311 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms