RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ATG16L2Q8NAA4 619 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 GPA33Q99795 319 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 SF3B5Q9BWJ5 86 aaKnown RBP19.42■□□□□ 0.7
C9orf3-222ENST00000496567 OSBPL10Q9BXB5 764 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 GLRX2Q9NS18 164 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 KIF17Q9P2E2 1029 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 NKX1-2Q9UD57 310 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-222ENST00000496567 SEC14L4Q9UDX3 406 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 HIF3AQ9Y2N7 669 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 MAGED1Q9Y5V3 778 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-222ENST00000496567 POLEQ07864 2286 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 SAC3D1A6NKF1 404 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 IL2RAP01589 272 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 POU2F1P14859 743 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 KLK2P20151 261 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 PRPS1P60891 318 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 ZP4Q12836 540 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 COX10Q12887 443 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 PDK3Q15120 406 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 EIF2S3LQ2VIR3 472 aaKnown RBP19.41■□□□□ 0.7
C9orf3-222ENST00000496567 OR13C2Q8NGS9 318 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 OR51A7Q8NH64 312 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 PRR7Q8TB68 274 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 DNAJC9Q8WXX5 260 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 GTPBP3Q969Y2 492 aaKnown RBP19.41■□□□□ 0.7
C9orf3-222ENST00000496567 ZFP3Q96NJ6 502 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 OXGR1Q96P68 337 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 NDEL1Q9GZM8 345 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 GABARAPL1Q9H0R8 117 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 RNPEPL1Q9HAU8 725 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 GP6Q9HCN6 339 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 MEMO1Q9Y316 297 aa19.41■□□□□ 0.7
C9orf3-222ENST00000496567 A0A1B0GUH1 482 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 LOC102725191A0A1B0GVB3 256 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 MS4A18H0YCH9 400 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 RCBTB2O95199 551 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 PLGP00747 810 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-222ENST00000496567 TSPAN19P0C672 248 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 GLI4P10075 376 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 AHCYP23526 432 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 UQCRFS1P47985 274 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 PER3P56645 1201 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 RPS4XP62701 263 aaKnown RBP19.4■□□□□ 0.7
C9orf3-222ENST00000496567 IL1RL1Q01638 556 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 MS4A18Q3C1V0 323 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 CD300LDQ6UXZ3 194 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 SEM1Q6ZVN7 128 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 GPAT4Q86UL3 456 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 RPRMLQ8N4K4 120 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 C9orf106Q8NAJ2 232 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 ABHD3Q8WU67 409 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 TNFRSF13CQ96RJ3 184 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 C9orf16Q9BUW7 83 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 FANCFQ9NPI8 374 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 TAS2R5Q9NYW4 299 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 KLHL13Q9P2N7 655 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 SIGLEC7Q9Y286 467 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 TRAV27A0A087WT01 109 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 A0A1W2PNV4 684 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 CCL21O00585 134 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 RAMP1O60894 148 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 UQCRC1P31930 480 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 SLC16A1P53985 500 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 PMPCAQ10713 525 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 SLC17A1Q14916 467 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 POU4F3Q15319 338 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 FAHD1Q6P587 224 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 PXKQ7Z7A4 578 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 GMPPAQ96IJ6 420 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-222ENST00000496567 DMRTA2Q96SC8 542 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 CIB1Q99828 191 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 NIPSNAP1Q9BPW8 284 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 TACO1Q9BSH4 297 aaKnown RBP19.4■□□□□ 0.7
C9orf3-222ENST00000496567 UCK2Q9BZX2 261 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 EMC3Q9P0I2 261 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 NOX1Q9Y5S8 564 aa19.4■□□□□ 0.7
C9orf3-222ENST00000496567 ARHGAP21Q5T5U3 1957 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 IGKV3D-15A0A087WSY6 115 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF716A6NP11 495 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 GPR171O14626 319 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 RNF13O43567 381 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 PTP4A3O75365 173 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 ZNF43P17038 809 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 AQP2P41181 271 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 RPL18Q07020 188 aaKnown RBP19.39■□□□□ 0.69
C9orf3-222ENST00000496567 RIPPLY2Q5TAB7 128 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 RPL13AP3Q6NVV1 102 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 RASSF6Q6ZTQ3 369 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 UEVLDQ8IX04 471 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 KDM8Q8N371 416 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 EME1Q96AY2 570 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 BCO1Q9HAY6 547 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 NBASA2RRP1 2371 aa19.39■□□□□ 0.69
C9orf3-222ENST00000496567 C11orf98E9PRG8 122 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 PDLIM1O00151 329 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 CRHP06850 196 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 CEACAM8P31997 349 aaPredicted RBP19.38■□□□□ 0.69
C9orf3-222ENST00000496567 FHL1Q13642 323 aa19.38■□□□□ 0.69
C9orf3-222ENST00000496567 C1DQ13901 141 aaKnown RBP19.38■□□□□ 0.69
C9orf3-222ENST00000496567 ESPL1Q14674 2120 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms