RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.47□□□□□ -0.41
VTI1A-209ENST00000496445 CORO2BQ9UQ03 480 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 ABCA1O95477 2261 aa12.47□□□□□ -0.41
VTI1A-209ENST00000496445 ALPK2Q86TB3 2170 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 FBN1P35555 2871 aaKnown RBP12.46□□□□□ -0.41
VTI1A-209ENST00000496445 A0A096LNT2 108 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 A0A0B4J2E0 115 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 IGHV1-18A0A0C4DH31 117 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 A0A1B0GX12 115 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 HMGB1P1B2RPK0 211 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-209ENST00000496445 M0R082 166 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 WNT11O96014 354 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 GRPRP30550 384 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 PRPS1P60891 318 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 DMTNQ08495 405 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 NRF1Q16656 503 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 RUNDC3AQ59EK9 446 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 ALG10BQ5I7T1 473 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 FAM91A1Q658Y4 838 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 ZNF544Q6NX49 715 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 ABHD12BQ7Z5M8 362 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-209ENST00000496445 DHDDSQ86SQ9 333 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 KRT73Q86Y46 540 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 FBXL14Q8N1E6 418 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 DPP10Q8N608 796 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 HIPK4Q8NE63 616 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 ZNF417Q8TAU3 575 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 HTRA1Q92743 480 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-209ENST00000496445 SLC38A4Q969I6 547 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 ZNF587Q96SQ5 575 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-209ENST00000496445 SPATA5L1Q9BVQ7 753 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 LINC00470Q9BZP3 86 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 BARX1Q9HBU1 254 aaPredicted RBP12.46□□□□□ -0.41
VTI1A-209ENST00000496445 TESQ9UGI8 421 aaKnown RBP12.46□□□□□ -0.41
VTI1A-209ENST00000496445 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.41
VTI1A-209ENST00000496445 YLPM1P49750 1951 aaKnown RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 TRAV36DV7A0A075B6V5 113 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 IGHV4-30-2A0A087WSY4 118 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 AIM2O14862 343 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 TRAF3IP2O43734 574 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 SSX4O60224 188 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 SASH3O75995 380 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 KRT33AO76009 404 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 H2AFXP16104 143 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 CBLP22681 906 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 SLC6A2P23975 617 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 GTF2E2P29084 291 aaKnown RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 CLDN17P56750 224 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 PCBP3P57721 371 aaKnown RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 RGS8P57771 180 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 MTPNP58546 118 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 TUBA1BP68363 451 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 TUBA4AP68366 448 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 OR1Q1Q15612 314 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 FAM69AQ5T7M9 428 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 ULK3Q6PHR2 472 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 TUBA1AQ71U36 451 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 HDXQ7Z353 690 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 DEPDC4Q8N2C3 294 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 ADPRHL1Q8NDY3 354 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 DNAJA4Q8WW22 397 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 SLC38A2Q96QD8 506 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 VIPAS39Q9H9C1 493 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 OBP2BQ9NPH6 170 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 LEF1Q9UJU2 399 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-209ENST00000496445 MOKQ9UQ07 419 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 RCE1Q9Y256 329 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 ANGPT4Q9Y264 503 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 MXRA5Q9NR99 2828 aa12.45□□□□□ -0.42
VTI1A-209ENST00000496445 A0A087WUJ7 227 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 A0A096LPE4 126 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ARPC4-TTLL3A0A0A6YYG9 625 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 A0A1W2PPZ6 126 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 PRORSD1PA6NEY8 169 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 OR6C65A6NJZ3 312 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 EVPLLA8MZ36 301 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 RPL36A-HNRNPH2H7BZ11 118 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 H7C417 338 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 M0R3H8 397 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 OR2T1O43869 369 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 EDF1O60869 148 aaKnown RBP12.44□□□□□ -0.42
VTI1A-209ENST00000496445 MFN2O95140 757 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 HPRP00739 348 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 BGLAPP02818 100 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 OPN1SWP03999 348 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ZNF43P17038 809 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 NUDT6P53370 316 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 NCALDP61601 193 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 PPP2R2BQ00005 443 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ROR2Q01974 943 aaKnown RBP12.44□□□□□ -0.42
VTI1A-209ENST00000496445 NPTX1Q15818 432 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 C5orf46Q6UWT4 87 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 MYPOPQ86VE0 399 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-209ENST00000496445 ARMC8Q8IUR7 673 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 WDFY1Q8IWB7 410 aa12.44□□□□□ -0.42
VTI1A-209ENST00000496445 TMEM123Q8N131 208 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms