RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SGK2Q9HBY8 427 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 NRIP3Q9NQ35 241 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 C2orf42Q9NWW7 574 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 FOXJ3Q9UPW0 622 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 SCML2Q9UQR0 700 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 INSL5Q9Y5Q6 135 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 ETV7Q9Y603 341 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 PTPRDP23468 1912 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 TMEM272A0A1B0GTI8 110 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 A0A1W2PPE3 182 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 A0A1W2PQH9 124 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 OR2AT4A6NND4 320 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 F5H0A9 414 aaPredicted RBP8.34□□□□□ -1.07
HPS4-217ENST00000496385 CLDN4O14493 209 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 OGG1O15527 345 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 RBBP9O75884 186 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 LY86O95711 162 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 CRYABP02511 175 aaKnown RBP8.34□□□□□ -1.07
HPS4-217ENST00000496385 DDTP30046 118 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 ST8SIA6P61647 398 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 EIF5AP63241 154 aaKnown RBP8.34□□□□□ -1.07
HPS4-217ENST00000496385 FOXK2Q01167 660 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 PYY3Q5JQD4 70 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 GRASPQ7Z6J2 395 aaPredicted RBP8.34□□□□□ -1.07
HPS4-217ENST00000496385 CBARPQ8N350 705 aaPredicted RBP8.34□□□□□ -1.07
HPS4-217ENST00000496385 RNF175Q8N4F7 328 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 ZNF383Q8NA42 475 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 OR5M8Q8NGP6 311 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 C1orf216Q8TAB5 229 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 ZNF75AQ96N20 296 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 METTL9Q9H1A3 318 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 PRDM13Q9H4Q3 707 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 SFXN1Q9H9B4 322 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 YIPF1Q9Y548 306 aa8.34□□□□□ -1.07
HPS4-217ENST00000496385 C2orf16Q68DN1 1984 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 A0A087WUU8 490 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 METTL21EPA6NDL7 271 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 OR2W5A6NFC9 320 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 H7BY64 318 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 H7C417 338 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 FOXE1O00358 373 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 GAPDHSO14556 408 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 ZNF197O14709 1029 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 GPR39O43194 453 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 FADS1O60427 444 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 TBX19O60806 448 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 RLN1P04808 185 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 RHOP08100 348 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 DPP4P27487 766 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 DCTDP32321 178 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 AHRP35869 848 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PLEKHN1Q494U1 663 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 LY6G6FQ5SQ64 297 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 TMEM69Q5SWH9 247 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 MTFR2Q6P444 385 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 UNQ9370/PRO34162Q6UXP9 181 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 GLB1L2Q8IW92 636 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 IZUMO1Q8IYV9 350 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 CLDN19Q8N6F1 224 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 INO80EQ8NBZ0 244 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 OR2T33Q8NG76 320 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 OR5AP2Q8NGF4 316 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 OR4Q3Q8NH05 313 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 OR5AK3PQ8NH89 298 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PIGXQ8TBF5 258 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 SLC2A12Q8TD20 617 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ING5Q8WYH8 240 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 OR5P2Q8WZ92 322 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 C3orf49Q96BT1 292 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ZNF559Q9BR84 538 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 NAA11Q9BSU3 229 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 GAR1Q9NY12 217 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 MTFP1Q9UDX5 166 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 CRLS1Q9UJA2 301 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 PCDHGC4Q9Y5F7 938 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 TCF20Q9UGU0 1960 aaKnown RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 NPC1O15118 1278 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 LRG1P02750 347 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 HKR1P10072 659 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 COX5BP10606 129 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 SDHBP21912 280 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 DLSTP36957 453 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 CASRP41180 1078 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 TSPAN7P41732 249 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 MAGEB1P43366 347 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 RGS8P57771 180 aaPredicted RBP8.33□□□□□ -1.08
HPS4-217ENST00000496385 ACTC1P68032 377 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ACTA1P68133 377 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 HNF4GQ14541 408 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 BAP18Q8IXM2 172 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 C16orf78Q8WTQ4 265 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 GHSRQ92847 366 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 SLC25A38Q96DW6 304 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ASB16Q96NS5 453 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 CLCC1Q96S66 551 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 ZNF426Q9BUY5 554 aa8.33□□□□□ -1.08
HPS4-217ENST00000496385 FBXO44Q9H4M3 255 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms