RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 NSD1Q96L73 2696 aaPredicted RBP21.23■□□□□ 0.99
HLA-C-209ENST00000495835 A0A0B4J2E0 115 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 A0A1B0GX12 115 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 LGI1O95970 557 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 NPPAP01160 153 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 TROVE2P10155 538 aaKnown RBP eCLIP21.23■□□□□ 0.99
HLA-C-209ENST00000495835 SELENOPP49908 381 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 DMTNQ08495 405 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 INTS11Q5TA45 600 aaKnown RBP21.23■□□□□ 0.99
HLA-C-209ENST00000495835 H1FNTQ75WM6 255 aaPredicted RBP21.23■□□□□ 0.99
HLA-C-209ENST00000495835 PATL1Q86TB9 770 aaKnown RBP21.23■□□□□ 0.99
HLA-C-209ENST00000495835 MAGEE2Q8TD90 523 aaPredicted RBP21.23■□□□□ 0.99
HLA-C-209ENST00000495835 SMR3AQ99954 134 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 SH3GL1Q99961 368 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 DHRS9Q9BPW9 319 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 FKRPQ9H9S5 495 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 BARX1Q9HBU1 254 aaPredicted RBP21.23■□□□□ 0.99
HLA-C-209ENST00000495835 PLCE1Q9P212 2302 aa21.23■□□□□ 0.99
HLA-C-209ENST00000495835 IGKV1D-42A0A075B6H8 117 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 RPL36A-HNRNPH2H7BZ11 118 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 M0R1B8 84 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 CD8AP01732 235 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 HOXB4P17483 251 aaPredicted RBP21.22■□□□□ 0.99
HLA-C-209ENST00000495835 AQP1P29972 269 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 SH3BGRP55822 239 aaPredicted RBP21.22■□□□□ 0.99
HLA-C-209ENST00000495835 LTBQ06643 244 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 CYLC2Q14093 348 aaPredicted RBP21.22■□□□□ 0.99
HLA-C-209ENST00000495835 COQ5Q5HYK3 327 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 C9orf135Q5VTT2 229 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 ZNF544Q6NX49 715 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 NIPAL3Q6P499 406 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 ZNF613Q6PF04 617 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 CIARTQ8N365 385 aaPredicted RBP21.22■□□□□ 0.99
HLA-C-209ENST00000495835 RASSF5Q8WWW0 418 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 SLC41A3Q96GZ6 507 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 TMEM43Q9BTV4 400 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 TMEM120AQ9BXJ8 343 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 POU2F3Q9UKI9 436 aa21.22■□□□□ 0.99
HLA-C-209ENST00000495835 A0A1W2PR80 420 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 TRIM64A6NGJ6 449 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 TRIM64BA6NI03 449 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 M0QX08 132 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 AKAP8O43823 692 aaKnown RBP21.21■□□□□ 0.99
HLA-C-209ENST00000495835 ZNF432O94892 652 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 TTKP33981 857 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 MTPNP58546 118 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 NRF1Q16656 503 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 SCAIQ8N9R8 606 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 OR1K1Q8NGR3 316 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 ARHGDIGQ99819 225 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 CBLN4Q9NTU7 201 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 KLHL14Q9P2G3 628 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 B3GAT1Q9P2W7 334 aa21.21■□□□□ 0.99
HLA-C-209ENST00000495835 ZANQ9Y493 2812 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 E7EQL1 145 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 M0R082 166 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 TPST2O60704 377 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 SLC43A1O75387 559 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 GRPRP30550 384 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 CLDN17P56750 224 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 C1DQ13901 141 aaKnown RBP21.2■□□□□ 0.98
HLA-C-209ENST00000495835 DUSP7Q16829 419 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 CLEC12BQ2HXU8 276 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 TRMT5Q32P41 509 aaKnown RBP21.2■□□□□ 0.98
HLA-C-209ENST00000495835 C3orf36Q3SXR2 165 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 LINC00114Q6XXX2 140 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 FBXL14Q8N1E6 418 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 ZNF417Q8TAU3 575 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 ZNF587Q96SQ5 575 aaPredicted RBP21.2■□□□□ 0.98
HLA-C-209ENST00000495835 PRR14Q9BWN1 585 aa21.2■□□□□ 0.98
HLA-C-209ENST00000495835 ARPC4-TTLL3A0A0A6YYG9 625 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 LY6G6DO95868 133 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 PCGF2P35227 344 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 CDKN1AP38936 164 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 ARFIP2P53365 341 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 CDH12P55289 794 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 SLC25A3Q00325 362 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 SELPLGQ14242 412 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 MAPRE2Q15555 327 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 TBRG1Q3YBR2 411 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 NANOGP8Q6NSW7 305 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 HMBOX1Q6NT76 420 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 ANKRD16Q6P6B7 361 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 CCDC80Q76M96 950 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 LSRQ86X29 649 aaPredicted RBP21.19■□□□□ 0.98
HLA-C-209ENST00000495835 KDM8Q8N371 416 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 FAM169BQ8N8A8 192 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 SMYD1Q8NB12 490 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 MCHR1Q99705 422 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 NANOGQ9H9S0 305 aa21.19■□□□□ 0.98
HLA-C-209ENST00000495835 BBIP1A8MTZ0 92 aa21.18■□□□□ 0.98
HLA-C-209ENST00000495835 FBP2O00757 339 aa21.18■□□□□ 0.98
HLA-C-209ENST00000495835 MT-ATP6P00846 226 aa21.18■□□□□ 0.98
HLA-C-209ENST00000495835 VIMP08670 466 aaKnown RBP21.18■□□□□ 0.98
HLA-C-209ENST00000495835 CDH2P19022 906 aaPredicted RBP21.18■□□□□ 0.98
HLA-C-209ENST00000495835 VMACQ2NL98 169 aa21.18■□□□□ 0.98
HLA-C-209ENST00000495835 C11orf71Q6IPW1 123 aa21.18■□□□□ 0.98
HLA-C-209ENST00000495835 MUC15Q8N387 334 aa21.18■□□□□ 0.98
HLA-C-209ENST00000495835 PIK3C3Q8NEB9 887 aa21.18■□□□□ 0.98
HLA-C-209ENST00000495835 OR8J3Q8NGG0 315 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms