RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 STK35Q8TDR2 534 aa15.15■□□□□ 0.02
TMEM53-209ENST00000495630 PPP1R36Q96LQ0 422 aa15.15■□□□□ 0.02
TMEM53-209ENST00000495630 MS4A5Q9H3V2 200 aa15.15■□□□□ 0.02
TMEM53-209ENST00000495630 RCE1Q9Y256 329 aa15.15■□□□□ 0.02
TMEM53-209ENST00000495630 E9PBE3 544 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 SYNGR3O43761 229 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 SLC43A1O75387 559 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 MYZAPP0CAP1 466 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF43P17038 809 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 EGR1P18146 543 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 NR4A1P22736 598 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 CLDN17P56750 224 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 IL1RL1Q01638 556 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 CCNIQ14094 377 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 PDCD2Q16342 344 aaPredicted RBP15.14■□□□□ 0.01
TMEM53-209ENST00000495630 SLC9B1Q4ZJI4 515 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 LIN52Q52LA3 116 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF621Q6ZSS3 439 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 MYPOPQ86VE0 399 aaPredicted RBP15.14■□□□□ 0.01
TMEM53-209ENST00000495630 NUDCD3Q8IVD9 361 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 LRRC34Q8IZ02 419 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 CDK20Q8IZL9 346 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 C3orf56Q8N813 242 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 OR52P1PQ8NH57 321 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF418Q8TF45 676 aaPredicted RBP15.14■□□□□ 0.01
TMEM53-209ENST00000495630 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.14■□□□□ 0.01
TMEM53-209ENST00000495630 TMEM186Q96B77 213 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 PANX1Q96RD7 426 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 CRLF2Q9HC73 371 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 GPR35Q9HC97 309 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 HIF1ANQ9NWT6 349 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 REV1Q9UBZ9 1251 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.14■□□□□ 0.01
TMEM53-209ENST00000495630 SPEF1Q9Y4P9 236 aa15.14■□□□□ 0.01
TMEM53-209ENST00000495630 TMEM89A2RUT3 159 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 ITM2AO43736 263 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 AHSA1O95433 338 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 TMEM33P57088 247 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 LRRC74AQ0VAA2 488 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 SNTB2Q13425 540 aaKnown RBP15.13■□□□□ 0.01
TMEM53-209ENST00000495630 ELFN2Q5R3F8 820 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 COX20Q5RI15 118 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 VRK2Q86Y07 508 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 KDM8Q8N371 416 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 GPR137CQ8N3F9 429 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 FAM216AQ8WUB2 273 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 GCDHQ92947 438 aaPredicted RBP15.13■□□□□ 0.01
TMEM53-209ENST00000495630 OXGR1Q96P68 337 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 RACGAP1Q9H0H5 632 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 NOX3Q9HBY0 568 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 CALML5Q9NZT1 146 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 LGALS13Q9UHV8 139 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF232Q9UNY5 417 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 USP22Q9UPT9 525 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 GRIP1Q9Y3R0 1128 aa15.13■□□□□ 0.01
TMEM53-209ENST00000495630 TENM1Q9UKZ4 2725 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 FTCDNL1E5RQL4 147 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 KRT75O95678 551 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 TFP02787 698 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 PNMTP11086 282 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 LBPP18428 481 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 NCF2P19878 526 aaPredicted RBP15.12■□□□□ 0.01
TMEM53-209ENST00000495630 ETV4P43268 484 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 GPR6P46095 362 aaPredicted RBP15.12■□□□□ 0.01
TMEM53-209ENST00000495630 ACTG1P63261 375 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 NPRL3Q12980 569 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 MAPK11Q15759 364 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 CEACAM16Q2WEN9 425 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 REP15Q6BDI9 236 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 KRT80Q6KB66 452 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF836Q6ZNA1 936 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 USP43Q70EL4 1123 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 MDP1Q86V88 176 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF781Q8N8C0 355 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 CLDND2Q8NHS1 167 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 RDH5Q92781 318 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 MRPL24Q96A35 216 aaKnown RBP15.12■□□□□ 0.01
TMEM53-209ENST00000495630 SLC25A36Q96CQ1 311 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF837Q96EG3 531 aaPredicted RBP15.12■□□□□ 0.01
TMEM53-209ENST00000495630 TPK1Q9H3S4 243 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 ARMC7Q9H6L4 198 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 PCDHB10Q9UN67 800 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 RAP2CQ9Y3L5 183 aa15.12■□□□□ 0.01
TMEM53-209ENST00000495630 LOC102725191A0A1B0GVB3 256 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 ZNF503-AS2A6NEH8 195 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 M0R233 179 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 SERPINE1P05121 402 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 MSMBP08118 114 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 PRG2P13727 222 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 COL8A2P25067 703 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 RPL14P50914 215 aaKnown RBP15.11■□□□□ 0.01
TMEM53-209ENST00000495630 ABCE1P61221 599 aaKnown RBP15.11■□□□□ 0.01
TMEM53-209ENST00000495630 C1DQ13901 141 aaKnown RBP15.11■□□□□ 0.01
TMEM53-209ENST00000495630 LARS2Q15031 903 aaKnown RBP15.11■□□□□ 0.01
TMEM53-209ENST00000495630 RNF220Q5VTB9 566 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 SHQ1Q6PI26 577 aaKnown RBP15.11■□□□□ 0.01
TMEM53-209ENST00000495630 KIRREL3Q8IZU9 778 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 CLIP4Q8N3C7 705 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 TEX29Q8N6K0 151 aa15.11■□□□□ 0.01
TMEM53-209ENST00000495630 PIK3C3Q8NEB9 887 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms