RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SLC46A3Q7Z3Q1 461 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 ANKK1Q8NFD2 765 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 OR4F15Q8NGB8 312 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 ZBTB9Q96C00 473 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 SLC25A36Q96CQ1 311 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 PTDSS2Q9BVG9 487 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 BCL2L10Q9HD36 194 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 RAB21Q9UL25 225 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 RCE1Q9Y256 329 aa20.21■□□□□ 0.83
COL27A1-208ENST00000494780 RPL36A-HNRNPH2H7BZ11 118 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 NR5A2O00482 541 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 IGLV1-44P01699 117 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 OR4A8P0C604 315 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 CECR9P0C854 216 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 POLR2JP52435 117 aaKnown RBP20.2■□□□□ 0.82
COL27A1-208ENST00000494780 ROR2Q01974 943 aaKnown RBP20.2■□□□□ 0.82
COL27A1-208ENST00000494780 ADIPOQQ15848 244 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 SLC9B1Q4ZJI4 515 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 C6orf10Q5SRN2 563 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 FAM166AQ6J272 317 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 VPS33AQ96AX1 596 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 VRK1Q99986 396 aaPredicted RBP20.2■□□□□ 0.82
COL27A1-208ENST00000494780 NELFAQ9H3P2 528 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 PLK3Q9H4B4 646 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 FBXO9Q9UK97 447 aaPredicted RBP20.2■□□□□ 0.82
COL27A1-208ENST00000494780 KCNS2Q9ULS6 477 aa20.2■□□□□ 0.82
COL27A1-208ENST00000494780 A0A096LPE4 126 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 A0A1W2PPZ6 126 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 UBDO15205 165 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 FZD7O75084 574 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 ZNF43P17038 809 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 GTF2E2P29084 291 aaKnown RBP20.19■□□□□ 0.82
COL27A1-208ENST00000494780 RPS5P46782 204 aaKnown RBP20.19■□□□□ 0.82
COL27A1-208ENST00000494780 PPOXP50336 477 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 CLDN17P56750 224 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 TUBA1BP68363 451 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 TUBA4AP68366 448 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 EGR4Q05215 589 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 RGNQ15493 299 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 TUBA1AQ71U36 451 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 KDM8Q8N371 416 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 ARIH2OSQ8N7S6 290 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 ANKS4BQ8N8V4 417 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 MGARPQ8TDB4 240 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 FOXN4Q96NZ1 517 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 PRR14Q9BWN1 585 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 RAD21L1Q9H4I0 556 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 C12orf10Q9HB07 376 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 A4GALTQ9NPC4 353 aa20.19■□□□□ 0.82
COL27A1-208ENST00000494780 LOC100289279A0A1B0GTE1 492 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 ZNF432O94892 652 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 IGKV3-15P01624 115 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 APEHP13798 732 aaKnown RBP20.18■□□□□ 0.82
COL27A1-208ENST00000494780 IGFBP5P24593 272 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 SLC18A1P54219 525 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 FADDQ13158 208 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 CARTPTQ16568 116 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 VHLLQ6RSH7 139 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 C6orf89Q6UWU4 347 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 MAVSQ7Z434 540 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 ZNF540Q8NDQ6 660 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 NUP37Q8NFH4 326 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 OR9I1Q8NGQ6 314 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 BBS10Q8TAM1 723 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 MSI2Q96DH6 328 aaKnown RBP20.18■□□□□ 0.82
COL27A1-208ENST00000494780 KTI12Q96EK9 354 aaPredicted RBP20.18■□□□□ 0.82
COL27A1-208ENST00000494780 OXGR1Q96P68 337 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 RPS6KB2Q9UBS0 482 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 PCDHB14Q9Y5E9 798 aa20.18■□□□□ 0.82
COL27A1-208ENST00000494780 MALRD1Q5VYJ5 2156 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 IGHV4-61A0A0C4DH41 118 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 OR2T1O43869 369 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 SLC43A1O75387 559 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 NUDT7P0C024 238 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 BMP2P12643 396 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 CBR1P16152 277 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 CALCRP30988 508 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 ARF1P84077 181 aaKnown RBP20.17■□□□□ 0.82
COL27A1-208ENST00000494780 HOXC5Q00444 222 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 C5orf46Q6UWT4 87 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 MIER2Q8N344 545 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 GTF2H4Q92759 462 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 OR52B2Q96RD2 323 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 PAIP1Q9H074 479 aaKnown RBP20.17■□□□□ 0.82
COL27A1-208ENST00000494780 RAB1BQ9H0U4 201 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 ZNF442Q9H7R0 627 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 B3GAT1Q9P2W7 334 aa20.17■□□□□ 0.82
COL27A1-208ENST00000494780 SLC35F4A4IF30 521 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 VSTM5A8MXK1 200 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 CLIC1O00299 241 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 AIM2O14862 343 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 SRD5A1P18405 259 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 IDH3GP51553 393 aaPredicted RBP20.16■□□□□ 0.82
COL27A1-208ENST00000494780 HGFACQ04756 655 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 C1DQ13901 141 aaKnown RBP20.16■□□□□ 0.82
COL27A1-208ENST00000494780 IQCCQ4KMZ1 466 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 FAM69AQ5T7M9 428 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 MAL2Q969L2 176 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 CHODLQ9H9P2 273 aa20.16■□□□□ 0.82
COL27A1-208ENST00000494780 SEC61A2Q9H9S3 476 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms