RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 MAP2K1Q02750 393 aaPredicted RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 CHRNB3Q05901 458 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 C1orf61Q13536 156 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 ZSCAN25Q6NSZ9 544 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 UNQ9370/PRO34162Q6UXP9 181 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 RGS9BPQ6ZS82 235 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 TMEM110Q86TL2 294 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 PPP1R27Q86WC6 154 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 VRK2Q86Y07 508 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 SVOPLQ8N434 492 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 CATSPER1Q8NEC5 780 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 LINC01006Q8NI28 216 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 ST8SIA1Q92185 356 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 PIGCQ92535 297 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 RPUSD4Q96CM3 377 aaKnown RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 SLC35A5Q9BS91 424 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 GON7Q9BXV9 100 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 POLR2J2Q9GZM3 115 aaKnown RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 POLR2J3Q9H1A7 115 aaKnown RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 VCX2Q9H322 139 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 NARFLQ9H6Q4 476 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 TBK1Q9UHD2 729 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 CLEC4AQ9UMR7 237 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 TIMM10BQ9Y5J6 103 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 ROCK2O75116 1388 aaKnown RBP3.1□□□□□ -1.91
SMC4-224ENST00000494612 KDRP35968 1356 aa3.1□□□□□ -1.91
SMC4-224ENST00000494612 MAP2P11137 1827 aaKnown RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 CD163L1Q9NR16 1453 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 CCDC88AQ3V6T2 1871 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 A0A1W2PNV4 684 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 HIP1O00291 1037 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 TAPBPO15533 448 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 MBTPS2O43462 519 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 PFKFB2O60825 505 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 SNNO75324 88 aaPredicted RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 MMP23AO75900 390 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 ATP5LO75964 103 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 SUPT7LO94864 414 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 LALBAP00709 142 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 IGHV3-48P01763 117 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 IGHDP01880 384 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 IMPDH1P20839 514 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 CD1BP29016 333 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 NMT1P30419 496 aaKnown RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 HTR1FP30939 366 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 YWHABP31946 246 aaKnown RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 UGT1A5P35504 534 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 BTDP43251 543 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 APOC4P55056 127 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 UBE2HP62256 183 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 SPIBQ01892 262 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 TGFBR3Q03167 851 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 CSTF1Q05048 431 aaKnown RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 ZNF630Q2M218 657 aaPredicted RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 NSUN5P1Q3KNT7 163 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 PAGE3Q5JUK9 113 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 TBC1D21Q8IYX1 336 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 SLC34A3Q8N130 599 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 OR2L13Q8N349 312 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 OR2AP1Q8NGE2 309 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 OR52M1Q8NGK5 317 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 OR9A1PQ8NGU1 263 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 RLN3Q8WXF3 142 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 SMIM14Q96QK8 99 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 NPAS2Q99743 824 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 EBF4Q9BQW3 602 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 NAT9Q9BTE0 207 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 POLR1EQ9GZS1 481 aaKnown RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 LRRN3Q9H3W5 708 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 UFSP2Q9NUQ7 469 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 STAP1Q9ULZ2 295 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 TRAF3IP3Q9Y228 551 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 MRPS7Q9Y2R9 242 aaKnown RBP3.09□□□□□ -1.91
SMC4-224ENST00000494612 UGT2A1Q9Y4X1 527 aa3.09□□□□□ -1.91
SMC4-224ENST00000494612 A0A1W2PP64 1363 aa3.09□□□□□ -1.92
SMC4-224ENST00000494612 RTL1A6NKG5 1358 aa3.09□□□□□ -1.92
SMC4-224ENST00000494612 RAI1Q7Z5J4 1906 aaPredicted RBP3.09□□□□□ -1.92
SMC4-224ENST00000494612 COL5A3P25940 1745 aaPredicted RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 VIRMAQ69YN4 1812 aaKnown RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 IGKV1D-8A0A087WSZ0 117 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 C15orf38-AP3S2A0A0A6YYH1 394 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 USP27XA6NNY8 438 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 TRDCB7Z8K6 153 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 ABCD4O14678 606 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 POLR2DO15514 142 aaKnown RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 ZNF208O43345 1280 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 CXCL13O43927 109 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 ECI2O75521 394 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 DUX4L4P0CJ87 422 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 ZNF44P15621 663 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 GLRA2P23416 452 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 GABRR1P24046 479 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 GSSP48637 474 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 TDO2P48775 406 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 CASP4P49662 377 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 GBX2P52951 348 aaPredicted RBP3.08□□□□□ -1.92
SMC4-224ENST00000494612 PLK1P53350 603 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 TIMM10P62072 90 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 FGL1Q08830 312 aa3.08□□□□□ -1.92
SMC4-224ENST00000494612 ORC2Q13416 577 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms